Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2129
Experiment: MoYLS4 with Cephalothin 1.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Cephalothin 1.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,649,149 | + | -0.4 | |||
2,649,391 | - | +0.0 | |||
2,649,658 | + | +0.3 | |||
2,649,703 | + | -0.6 | |||
2,649,749 | + | -0.2 | |||
2,649,824 | + | -0.3 | |||
2,650,253 | - | DvMF_2129 | 0.34 | -0.2 | |
2,650,437 | - | DvMF_2129 | 0.45 | -0.7 | |
2,650,568 | - | DvMF_2129 | 0.53 | -0.1 | |
2,650,575 | - | DvMF_2129 | 0.53 | -0.5 | |
2,650,651 | - | DvMF_2129 | 0.58 | -0.7 | |
2,650,864 | + | DvMF_2129 | 0.71 | -0.0 | |
2,650,887 | - | DvMF_2129 | 0.72 | -0.4 | |
2,650,918 | - | DvMF_2129 | 0.74 | -0.4 | |
2,650,920 | + | DvMF_2129 | 0.74 | -0.0 | |
2,650,941 | - | DvMF_2129 | 0.75 | -0.5 | |
2,650,989 | + | DvMF_2129 | 0.78 | +0.0 | |
2,651,093 | + | DvMF_2129 | 0.84 | -0.0 | |
2,651,115 | + | DvMF_2129 | 0.86 | -0.5 | |
2,651,407 | - | -0.2 | |||
2,651,446 | + | -0.2 | |||
2,651,454 | - | +0.2 | |||
2,651,612 | - | +0.1 | |||
2,651,612 | - | +0.2 | |||
2,651,689 | + | +0.1 | |||
2,651,922 | - | +0.0 | |||
2,651,959 | + | -0.2 | |||
2,652,142 | - | +0.0 | |||
2,652,257 | - | DvMF_2130 | 0.10 | -0.8 | |
2,652,303 | + | DvMF_2130 | 0.18 | -0.1 | |
2,652,315 | + | DvMF_2130 | 0.20 | -0.5 | |
2,652,338 | - | DvMF_2130 | 0.23 | -0.0 |
Or see this region's nucleotide sequence