Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1985
Experiment: MoYLS4 with Cephalothin 1.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Cephalothin 1.25 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,456,103 | + | DvMF_1984 | 0.22 | -1.0 | |
| 2,456,163 | - | DvMF_1984 | 0.27 | -0.9 | |
| 2,456,180 | - | DvMF_1984 | 0.29 | -0.7 | |
| 2,456,397 | - | DvMF_1984 | 0.46 | -0.0 | |
| 2,456,399 | + | DvMF_1984 | 0.46 | -1.5 | |
| 2,456,756 | + | DvMF_1984 | 0.75 | -0.9 | |
| 2,456,768 | + | DvMF_1984 | 0.76 | -0.7 | |
| 2,456,839 | - | DvMF_1984 | 0.81 | -1.0 | |
| 2,456,914 | - | DvMF_1984 | 0.87 | -0.8 | |
| 2,457,228 | + | DvMF_1985 | 0.22 | -0.9 | |
| 2,457,267 | - | DvMF_1985 | 0.27 | -1.1 | |
| 2,457,303 | + | DvMF_1985 | 0.32 | -2.0 | |
| 2,457,319 | - | DvMF_1985 | 0.34 | -1.9 | |
| 2,457,399 | - | DvMF_1985 | 0.45 | -0.6 | |
| 2,457,445 | + | DvMF_1985 | 0.52 | -1.4 | |
| 2,457,495 | - | DvMF_1985 | 0.59 | -1.8 | |
| 2,457,738 | + | -0.2 | |||
| 2,457,738 | + | +0.0 | |||
| 2,457,746 | + | -0.3 | |||
| 2,457,830 | + | -0.9 | |||
| 2,457,863 | + | -0.6 | |||
| 2,458,011 | + | +0.1 | |||
| 2,458,257 | + | DvMF_1986 | 0.12 | -0.3 | |
| 2,458,498 | - | DvMF_1986 | 0.46 | -0.1 | |
| 2,458,516 | - | DvMF_1986 | 0.48 | -0.6 | |
| 2,458,529 | - | DvMF_1986 | 0.50 | -0.1 | |
| 2,458,530 | - | DvMF_1986 | 0.50 | -0.2 | |
| 2,458,746 | + | DvMF_1986 | 0.80 | -1.1 |
Or see this region's nucleotide sequence