Experiment: MoYLS4 with Cephalothin 1.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1983 and DvMF_1984 are separated by 607 nucleotides DvMF_1984 and DvMF_1985 are separated by 1 nucleotides
DvMF_1983: DvMF_1983 - Phosphoglycolate phosphatase (RefSeq), at 2,454,443 to 2,455,216
_1983
DvMF_1984: DvMF_1984 - protein of unknown function DUF81 (RefSeq), at 2,455,824 to 2,457,071
_1984
DvMF_1985: DvMF_1985 - hypothetical protein (RefSeq), at 2,457,073 to 2,457,792
_1985
Position (kb)
2455
2456
2457
2458 Strain fitness (log2 ratio)
-2
-1
0
1 at 2454.858 kb on - strand, within DvMF_1983 at 2454.897 kb on + strand, within DvMF_1983 at 2455.255 kb on - strand at 2455.255 kb on - strand at 2455.269 kb on - strand at 2455.274 kb on - strand at 2455.386 kb on + strand at 2455.542 kb on - strand at 2455.542 kb on - strand at 2455.775 kb on - strand at 2455.782 kb on + strand at 2455.821 kb on + strand at 2456.103 kb on + strand, within DvMF_1984 at 2456.163 kb on - strand, within DvMF_1984 at 2456.180 kb on - strand, within DvMF_1984 at 2456.397 kb on - strand, within DvMF_1984 at 2456.399 kb on + strand, within DvMF_1984 at 2456.756 kb on + strand, within DvMF_1984 at 2456.768 kb on + strand, within DvMF_1984 at 2456.839 kb on - strand, within DvMF_1984 at 2456.914 kb on - strand, within DvMF_1984 at 2457.228 kb on + strand, within DvMF_1985 at 2457.267 kb on - strand, within DvMF_1985 at 2457.303 kb on + strand, within DvMF_1985 at 2457.319 kb on - strand, within DvMF_1985 at 2457.399 kb on - strand, within DvMF_1985 at 2457.445 kb on + strand, within DvMF_1985 at 2457.495 kb on - strand, within DvMF_1985 at 2457.738 kb on + strand at 2457.738 kb on + strand at 2457.746 kb on + strand at 2457.830 kb on + strand at 2457.863 kb on + strand at 2458.011 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Cephalothin 1.25 mg/ml remove 2,454,858 - DvMF_1983 0.54 -0.4 2,454,897 + DvMF_1983 0.59 -0.4 2,455,255 - -0.5 2,455,255 - -0.5 2,455,269 - +0.2 2,455,274 - -0.5 2,455,386 + +0.0 2,455,542 - -0.6 2,455,542 - -1.1 2,455,775 - -0.3 2,455,782 + -0.6 2,455,821 + -1.2 2,456,103 + DvMF_1984 0.22 -1.0 2,456,163 - DvMF_1984 0.27 -0.9 2,456,180 - DvMF_1984 0.29 -0.7 2,456,397 - DvMF_1984 0.46 -0.0 2,456,399 + DvMF_1984 0.46 -1.5 2,456,756 + DvMF_1984 0.75 -0.9 2,456,768 + DvMF_1984 0.76 -0.7 2,456,839 - DvMF_1984 0.81 -1.0 2,456,914 - DvMF_1984 0.87 -0.8 2,457,228 + DvMF_1985 0.22 -0.9 2,457,267 - DvMF_1985 0.27 -1.1 2,457,303 + DvMF_1985 0.32 -2.0 2,457,319 - DvMF_1985 0.34 -1.9 2,457,399 - DvMF_1985 0.45 -0.6 2,457,445 + DvMF_1985 0.52 -1.4 2,457,495 - DvMF_1985 0.59 -1.8 2,457,738 + -0.2 2,457,738 + +0.0 2,457,746 + -0.3 2,457,830 + -0.9 2,457,863 + -0.6 2,458,011 + +0.1
Or see this region's nucleotide sequence