Experiment: MoYLS4 with Cephalothin 1.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1831 and DvMF_1832 overlap by 4 nucleotides DvMF_1832 and DvMF_1833 overlap by 1 nucleotides
DvMF_1831: DvMF_1831 - transcriptional regulator, MarR family (RefSeq), at 2,235,331 to 2,235,993
_1831
DvMF_1832: DvMF_1832 - N-acylneuraminate-9-phosphate synthase (RefSeq), at 2,235,990 to 2,237,174
_1832
DvMF_1833: DvMF_1833 - hypothetical protein (RefSeq), at 2,237,174 to 2,238,373
_1833
Position (kb)
2235
2236
2237
2238 Strain fitness (log2 ratio)
-1
0
1 at 2235.165 kb on - strand at 2235.172 kb on + strand at 2235.349 kb on + strand at 2235.357 kb on - strand at 2235.357 kb on - strand at 2235.599 kb on - strand, within DvMF_1831 at 2235.687 kb on + strand, within DvMF_1831 at 2235.725 kb on - strand, within DvMF_1831 at 2235.843 kb on + strand, within DvMF_1831 at 2235.846 kb on - strand, within DvMF_1831 at 2235.995 kb on - strand at 2236.205 kb on + strand, within DvMF_1832 at 2236.255 kb on + strand, within DvMF_1832 at 2236.359 kb on + strand, within DvMF_1832 at 2236.402 kb on - strand, within DvMF_1832 at 2236.423 kb on - strand, within DvMF_1832 at 2236.625 kb on - strand, within DvMF_1832 at 2236.668 kb on - strand, within DvMF_1832 at 2236.725 kb on - strand, within DvMF_1832 at 2236.786 kb on - strand, within DvMF_1832 at 2236.800 kb on - strand, within DvMF_1832 at 2236.840 kb on - strand, within DvMF_1832 at 2236.853 kb on - strand, within DvMF_1832 at 2237.307 kb on + strand, within DvMF_1833 at 2237.315 kb on - strand, within DvMF_1833 at 2237.459 kb on - strand, within DvMF_1833 at 2237.533 kb on + strand, within DvMF_1833 at 2237.645 kb on + strand, within DvMF_1833 at 2237.648 kb on - strand, within DvMF_1833 at 2237.653 kb on - strand, within DvMF_1833 at 2237.709 kb on - strand, within DvMF_1833 at 2237.882 kb on - strand, within DvMF_1833 at 2237.908 kb on + strand, within DvMF_1833 at 2238.100 kb on - strand, within DvMF_1833
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Cephalothin 1.25 mg/ml remove 2,235,165 - +0.1 2,235,172 + -0.2 2,235,349 + -0.2 2,235,357 - +0.0 2,235,357 - -1.2 2,235,599 - DvMF_1831 0.40 -0.4 2,235,687 + DvMF_1831 0.54 -0.4 2,235,725 - DvMF_1831 0.59 -0.1 2,235,843 + DvMF_1831 0.77 -0.3 2,235,846 - DvMF_1831 0.78 -0.2 2,235,995 - -0.1 2,236,205 + DvMF_1832 0.18 -0.2 2,236,255 + DvMF_1832 0.22 +0.4 2,236,359 + DvMF_1832 0.31 -0.2 2,236,402 - DvMF_1832 0.35 -0.2 2,236,423 - DvMF_1832 0.37 +0.8 2,236,625 - DvMF_1832 0.54 +0.2 2,236,668 - DvMF_1832 0.57 -0.0 2,236,725 - DvMF_1832 0.62 -0.4 2,236,786 - DvMF_1832 0.67 -0.3 2,236,800 - DvMF_1832 0.68 -0.2 2,236,840 - DvMF_1832 0.72 +0.2 2,236,853 - DvMF_1832 0.73 -0.2 2,237,307 + DvMF_1833 0.11 -0.1 2,237,315 - DvMF_1833 0.12 +0.1 2,237,459 - DvMF_1833 0.24 -0.0 2,237,533 + DvMF_1833 0.30 -0.3 2,237,645 + DvMF_1833 0.39 -0.0 2,237,648 - DvMF_1833 0.40 -0.1 2,237,653 - DvMF_1833 0.40 -0.3 2,237,709 - DvMF_1833 0.45 +0.1 2,237,882 - DvMF_1833 0.59 -0.4 2,237,908 + DvMF_1833 0.61 -0.3 2,238,100 - DvMF_1833 0.77 -0.5
Or see this region's nucleotide sequence