Experiment: MoYLS4 with Cephalothin 1.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0829 and DvMF_0830 are separated by 430 nucleotides DvMF_0830 and DvMF_0831 are separated by 236 nucleotides
DvMF_0829: DvMF_0829 - alpha/beta hydrolase fold protein (RefSeq), at 1,000,881 to 1,001,873
_0829
DvMF_0830: DvMF_0830 - HI0933 family protein (RefSeq), at 1,002,304 to 1,003,563
_0830
DvMF_0831: DvMF_0831 - protein of unknown function DUF21 (RefSeq), at 1,003,800 to 1,005,158
_0831
Position (kb)
1002
1003
1004 Strain fitness (log2 ratio)
-1
0
1 at 1001.630 kb on - strand, within DvMF_0829 at 1001.636 kb on - strand, within DvMF_0829 at 1002.078 kb on - strand at 1002.285 kb on + strand at 1002.754 kb on - strand, within DvMF_0830 at 1002.913 kb on + strand, within DvMF_0830 at 1002.985 kb on + strand, within DvMF_0830 at 1002.993 kb on - strand, within DvMF_0830 at 1003.000 kb on + strand, within DvMF_0830 at 1003.113 kb on - strand, within DvMF_0830 at 1003.147 kb on + strand, within DvMF_0830 at 1003.324 kb on + strand, within DvMF_0830 at 1003.329 kb on + strand, within DvMF_0830 at 1003.362 kb on - strand, within DvMF_0830 at 1003.459 kb on + strand at 1003.477 kb on - strand at 1003.796 kb on - strand at 1003.863 kb on - strand at 1003.965 kb on + strand, within DvMF_0831 at 1003.997 kb on + strand, within DvMF_0831 at 1003.997 kb on + strand, within DvMF_0831 at 1004.005 kb on - strand, within DvMF_0831 at 1004.085 kb on + strand, within DvMF_0831 at 1004.210 kb on - strand, within DvMF_0831 at 1004.212 kb on + strand, within DvMF_0831 at 1004.212 kb on + strand, within DvMF_0831 at 1004.233 kb on + strand, within DvMF_0831 at 1004.505 kb on + strand, within DvMF_0831
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Cephalothin 1.25 mg/ml remove 1,001,630 - DvMF_0829 0.75 -0.0 1,001,636 - DvMF_0829 0.76 -0.6 1,002,078 - -0.2 1,002,285 + -0.3 1,002,754 - DvMF_0830 0.36 -0.6 1,002,913 + DvMF_0830 0.48 -0.3 1,002,985 + DvMF_0830 0.54 -0.3 1,002,993 - DvMF_0830 0.55 -0.3 1,003,000 + DvMF_0830 0.55 +0.0 1,003,113 - DvMF_0830 0.64 -0.3 1,003,147 + DvMF_0830 0.67 +0.1 1,003,324 + DvMF_0830 0.81 -0.4 1,003,329 + DvMF_0830 0.81 +0.1 1,003,362 - DvMF_0830 0.84 +0.2 1,003,459 + -0.1 1,003,477 - -0.1 1,003,796 - -0.2 1,003,863 - -0.3 1,003,965 + DvMF_0831 0.12 -0.1 1,003,997 + DvMF_0831 0.14 -0.3 1,003,997 + DvMF_0831 0.14 -0.2 1,004,005 - DvMF_0831 0.15 -0.4 1,004,085 + DvMF_0831 0.21 -0.1 1,004,210 - DvMF_0831 0.30 -1.3 1,004,212 + DvMF_0831 0.30 -0.5 1,004,212 + DvMF_0831 0.30 -0.4 1,004,233 + DvMF_0831 0.32 -0.1 1,004,505 + DvMF_0831 0.52 -0.1
Or see this region's nucleotide sequence