Experiment: MoYLS4 with Cephalothin 1.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0590 and DvMF_0591 are separated by 313 nucleotides DvMF_0591 and DvMF_0592 are separated by 239 nucleotides DvMF_0592 and DvMF_0593 are separated by 345 nucleotides
DvMF_0590: DvMF_0590 - ATP-dependent protease, putative (RefSeq), at 699,737 to 702,172
_0590
DvMF_0591: DvMF_0591 - hypothetical protein (RefSeq), at 702,486 to 702,674
_0591
DvMF_0592: DvMF_0592 - major facilitator superfamily MFS_1 (RefSeq), at 702,914 to 704,065
_0592
DvMF_0593: DvMF_0593 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 704,411 to 705,748
_0593
Position (kb) 702
703
704
705 Strain fitness (log2 ratio) -1
0
1 at 702.074 kb on + strand at 702.216 kb on - strand at 702.738 kb on - strand at 702.963 kb on + strand at 702.965 kb on + strand at 703.034 kb on + strand, within DvMF_0592 at 703.050 kb on + strand, within DvMF_0592 at 703.073 kb on - strand, within DvMF_0592 at 703.083 kb on - strand, within DvMF_0592 at 703.258 kb on + strand, within DvMF_0592 at 703.541 kb on - strand, within DvMF_0592 at 703.581 kb on + strand, within DvMF_0592 at 703.629 kb on - strand, within DvMF_0592 at 703.708 kb on + strand, within DvMF_0592 at 703.842 kb on + strand, within DvMF_0592 at 703.943 kb on - strand, within DvMF_0592 at 703.955 kb on - strand at 703.972 kb on + strand at 703.980 kb on - strand at 703.991 kb on - strand at 704.610 kb on - strand, within DvMF_0593 at 704.724 kb on + strand, within DvMF_0593
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Cephalothin 1.25 mg/ml remove 702,074 + -0.8 702,216 - -0.2 702,738 - -0.4 702,963 + -0.8 702,965 + -0.3 703,034 + DvMF_0592 0.10 -0.3 703,050 + DvMF_0592 0.12 +0.0 703,073 - DvMF_0592 0.14 -0.3 703,083 - DvMF_0592 0.15 -0.5 703,258 + DvMF_0592 0.30 -0.2 703,541 - DvMF_0592 0.54 -0.1 703,581 + DvMF_0592 0.58 -0.9 703,629 - DvMF_0592 0.62 -0.2 703,708 + DvMF_0592 0.69 -1.0 703,842 + DvMF_0592 0.81 -0.7 703,943 - DvMF_0592 0.89 -0.2 703,955 - -0.5 703,972 + -0.2 703,980 - -0.1 703,991 - +0.6 704,610 - DvMF_0593 0.15 -1.6 704,724 + DvMF_0593 0.23 -0.1
Or see this region's nucleotide sequence