Experiment: BHIS with perchlorate 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0744 and BT0745 overlap by 4 nucleotides BT0745 and BT0746 are separated by 3 nucleotides BT0746 and BT0747 are separated by 83 nucleotides
BT0744: BT0744 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (NCBI ptt file), at 922,791 to 923,312
BT0744
BT0745: BT0745 - 3-deoxy-manno-octulosonate cytidylyltransferase (NCBI ptt file), at 923,309 to 924,061
BT0745
BT0746: BT0746 - putative zinc protease (NCBI ptt file), at 924,065 to 925,348
BT0746
BT0747: BT0747 - putative phosphatidylinositol-4-phosphate 5-kinase (NCBI ptt file), at 925,432 to 926,601
BT0747
Position (kb) 924
925
926 Strain fitness (log2 ratio) -2
-1
0
1 at 924.078 kb on + strand at 924.090 kb on + strand at 924.200 kb on - strand, within BT0746 at 924.320 kb on + strand, within BT0746 at 924.367 kb on + strand, within BT0746 at 924.463 kb on + strand, within BT0746 at 924.508 kb on + strand, within BT0746 at 924.645 kb on - strand, within BT0746 at 924.847 kb on + strand, within BT0746 at 924.847 kb on + strand, within BT0746 at 924.886 kb on - strand, within BT0746 at 924.937 kb on + strand, within BT0746 at 924.961 kb on + strand, within BT0746 at 925.136 kb on - strand, within BT0746 at 925.296 kb on - strand at 926.080 kb on + strand, within BT0747 at 926.214 kb on + strand, within BT0747 at 926.219 kb on - strand, within BT0747
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with perchlorate 100 mM remove 924,078 + -1.1 924,090 + -0.1 924,200 - BT0746 0.11 -2.5 924,320 + BT0746 0.20 -1.8 924,367 + BT0746 0.24 -1.9 924,463 + BT0746 0.31 -0.5 924,508 + BT0746 0.35 -2.1 924,645 - BT0746 0.45 -1.9 924,847 + BT0746 0.61 +0.1 924,847 + BT0746 0.61 -1.2 924,886 - BT0746 0.64 -1.9 924,937 + BT0746 0.68 -1.9 924,961 + BT0746 0.70 -0.9 925,136 - BT0746 0.83 -1.7 925,296 - -1.5 926,080 + BT0747 0.55 -0.5 926,214 + BT0747 0.67 -1.7 926,219 - BT0747 0.67 -2.0
Or see this region's nucleotide sequence