Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03878
Experiment: PYE with Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with Spectinomycin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,039,609 | - | CCNA_03876 | 0.82 | -0.2 | |
4,039,874 | - | +1.2 | |||
4,039,881 | - | +1.0 | |||
4,039,900 | - | -1.4 | |||
4,039,961 | - | -0.9 | |||
4,039,967 | + | +1.9 | |||
4,040,017 | + | -0.1 | |||
4,040,045 | + | +0.1 | |||
4,040,116 | + | -1.1 | |||
4,040,138 | - | +0.9 | |||
4,040,147 | - | +1.0 | |||
4,040,606 | - | +0.2 | |||
4,040,625 | - | +1.2 | |||
4,040,625 | - | +0.6 | |||
4,040,640 | - | +1.0 | |||
4,040,640 | - | +1.1 | |||
4,040,664 | - | +0.5 | |||
4,040,706 | - | CCNA_03878 | 0.11 | -1.0 | |
4,041,640 | + | -1.6 | |||
4,041,640 | + | -0.4 | |||
4,041,640 | + | -0.8 | |||
4,041,657 | + | -0.4 |
Or see this region's nucleotide sequence