Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03658

Experiment: PYE with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Spectinomycin 0.025 mg/ml
3,818,422	-				+2.4
3,818,429	-				+1.2
3,818,436	-				+1.9
3,818,463	-				+1.0
3,818,470	-				-1.3
3,818,470	-				+1.1
3,818,470	-				-1.0
3,818,470	-				+1.3
3,818,470	-				+0.2
3,818,470	-				-0.7
3,818,470	-				-2.5
3,818,470	-				-0.8
3,818,470	-				+1.6
3,818,470	-				-0.7
3,818,470	-				-0.7
3,818,470	-				+0.1
3,818,470	-				+1.4
3,818,470	-				-1.2
3,818,470	-				+0.3
3,818,470	-				-1.9
3,818,470	-				-1.4
3,818,470	-				+2.8
3,818,470	-				-0.8
3,818,470	-				+2.2
3,818,470	-				-1.9
3,818,480	-				-0.1
3,818,542	+		CCNA_03657	0.13	-1.0
3,818,550	-		CCNA_03657	0.14	+1.0
3,818,646	-		CCNA_03657	0.26	-1.5
3,818,659	+		CCNA_03657	0.28	-1.1
3,818,671	+		CCNA_03657	0.29	-0.4
3,818,744	-		CCNA_03657	0.38	-1.7
3,818,790	-				+0.6
3,818,893	-		CCNA_03657	0.56	+0.2
3,818,926	-		CCNA_03657	0.60	-0.1
3,818,936	+		CCNA_03657	0.61	-1.8
3,818,945	+		CCNA_03657	0.62	+0.3
3,818,953	+		CCNA_03657	0.63	-0.1
3,818,958	-		CCNA_03657	0.64	+2.4
3,819,011	-		CCNA_03657	0.70	-1.0
3,819,019	-		CCNA_03657	0.71	+1.2
3,819,078	-		CCNA_03657	0.78	-1.7
3,819,092	-		CCNA_03657	0.80	-1.2
3,819,108	-		CCNA_03657	0.82	-1.8
3,819,255	-				-1.1
3,819,276	-				-2.3
3,819,308	-				+0.0
3,819,347	+				-0.8
3,819,355	-				+1.6
3,819,361	-				-0.9
3,819,371	-				-0.0
3,819,391	-				-0.2
3,819,402	-		CCNA_03658	0.11	-2.1
3,819,442	-		CCNA_03658	0.14	-1.7
3,819,452	-		CCNA_03658	0.15	-1.7
3,819,462	-		CCNA_03658	0.16	+0.1
3,819,467	+		CCNA_03658	0.16	-0.1
3,819,527	-		CCNA_03658	0.21	-2.0
3,819,549	-		CCNA_03658	0.23	-0.7
3,819,577	-		CCNA_03658	0.25	-0.0
3,819,668	-		CCNA_03658	0.33	-1.2
3,819,710	-		CCNA_03658	0.36	-1.5
3,819,712	-		CCNA_03658	0.36	-2.9
3,819,754	-		CCNA_03658	0.40	-1.9
3,819,775	-		CCNA_03658	0.41	-0.4
3,819,782	-		CCNA_03658	0.42	-1.2
3,819,787	-		CCNA_03658	0.42	-1.5
3,819,871	-		CCNA_03658	0.49	-0.3
3,819,897	+		CCNA_03658	0.51	+1.9
3,819,905	-		CCNA_03658	0.52	-1.3
3,820,027	-		CCNA_03658	0.62	-0.3
3,820,027	-				+1.9
3,820,046	-		CCNA_03658	0.63	-2.9
3,820,062	-		CCNA_03658	0.65	-2.0
3,820,072	-		CCNA_03658	0.66	-0.5
3,820,072	-		CCNA_03658	0.66	-1.4
3,820,077	-		CCNA_03658	0.66	-0.8
3,820,119	-				+0.1
3,820,119	-		CCNA_03658	0.69	-0.6
3,820,119	-		CCNA_03658	0.69	-2.2
3,820,139	+		CCNA_03658	0.71	-0.7
3,820,240	-		CCNA_03658	0.79	+0.2
3,820,282	-		CCNA_03658	0.83	-1.6
3,820,357	-		CCNA_03658	0.89	-0.6
3,820,369	-		CCNA_03658	0.90	-1.6
3,820,369	-		CCNA_03658	0.90	+0.2
3,820,369	-		CCNA_03658	0.90	-1.8
3,820,375	-				-0.8
3,820,505	-				-1.7
3,820,515	-				+1.6
3,820,561	-				-1.0
3,820,561	-				+0.4
3,820,561	-				+0.2
3,820,561	-				-1.5
3,820,575	-				-1.3
3,820,586	-				-0.1
3,820,615	-		CCNA_03659	0.15	-0.2
3,820,647	-		CCNA_03659	0.20	-0.3
3,820,654	+		CCNA_03659	0.21	-1.1
3,820,662	-		CCNA_03659	0.22	-0.1
3,820,662	-		CCNA_03659	0.22	+0.2
3,820,662	-		CCNA_03659	0.22	-0.1
3,820,708	+		CCNA_03659	0.29	-2.1
3,820,744	+		CCNA_03659	0.35	+1.3
3,820,752	+		CCNA_03659	0.36	+0.0
3,820,753	-		CCNA_03659	0.36	-0.7
3,820,773	+		CCNA_03659	0.39	-1.4
3,820,775	+		CCNA_03659	0.40	-0.4
3,820,781	+		CCNA_03659	0.40	-2.0
3,820,781	+		CCNA_03659	0.40	-0.4
3,820,783	-		CCNA_03659	0.41	-0.6
3,820,789	-		CCNA_03659	0.42	-0.3
3,820,794	-		CCNA_03659	0.42	+1.1
3,820,796	+		CCNA_03659	0.43	-1.1
3,820,796	+		CCNA_03659	0.43	-1.2
3,820,804	-		CCNA_03659	0.44	-0.7
3,820,804	-		CCNA_03659	0.44	-0.9
3,820,845	+		CCNA_03659	0.50	-0.6
3,820,845	+		CCNA_03659	0.50	+2.1
3,820,890	+		CCNA_03659	0.57	-1.4
3,820,908	-		CCNA_03659	0.60	-2.0
3,820,918	+		CCNA_03659	0.61	-0.9
3,820,924	+		CCNA_03659	0.62	-0.6
3,820,993	+		CCNA_03659	0.73	+0.6
3,821,057	-		CCNA_03659	0.82	+0.2
3,821,075	+		CCNA_03659	0.85	+0.2
3,821,089	-		CCNA_03659	0.87	-0.3
3,821,127	+				-0.3
3,821,135	-				-0.1
3,821,137	-				-1.2
3,821,139	+				-0.2
3,821,171	-				-0.8
3,821,192	-				+1.5
3,821,221	+				-0.6
3,821,224	-				-0.8
3,821,229	-				+1.3
3,821,279	-		CCNA_03660	0.21	-0.3
3,821,280	+		CCNA_03660	0.21	-1.3
3,821,280	+		CCNA_03660	0.21	-1.0
3,821,288	-		CCNA_03660	0.24	-0.1
3,821,288	-		CCNA_03660	0.24	-1.1
3,821,307	-		CCNA_03660	0.31	+1.0
3,821,372	+				+1.9
3,821,380	-		CCNA_03660	0.58	+0.0
3,821,389	+		CCNA_03660	0.61	-1.1
3,821,389	+		CCNA_03660	0.61	-0.0
3,821,389	+		CCNA_03660	0.61	-1.5
3,821,389	+		CCNA_03660	0.61	+0.9
3,821,397	-		CCNA_03660	0.64	-0.3
3,821,412	-		CCNA_03660	0.70	+0.5
3,821,435	-		CCNA_03660	0.79	-1.6
3,821,440	+		CCNA_03660	0.80	-1.4
3,821,445	+		CCNA_03660	0.82	-0.1
3,821,450	+		CCNA_03660	0.84	-1.1
3,821,458	+		CCNA_03660	0.87	-1.7
3,821,458	-		CCNA_03660	0.87	-1.8