Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03208

Experiment: PYE with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Spectinomycin 0.025 mg/ml
3,369,748	-				+0.5
3,369,751	+				-0.2
3,369,751	+				+2.5
3,369,751	+				-0.3
3,369,759	-				+0.1
3,369,761	+				-0.7
3,369,872	-		CCNA_03207	0.14	+0.9
3,369,886	+		CCNA_03207	0.16	+0.7
3,369,933	+		CCNA_03207	0.22	+0.5
3,370,036	-		CCNA_03207	0.34	+1.1
3,370,040	+		CCNA_03207	0.35	-1.0
3,370,062	-		CCNA_03207	0.37	+0.3
3,370,068	+		CCNA_03207	0.38	+0.0
3,370,119	+		CCNA_03207	0.44	+1.4
3,370,119	+		CCNA_03207	0.44	-0.8
3,370,134	+		CCNA_03207	0.46	+0.7
3,370,134	+		CCNA_03207	0.46	+1.0
3,370,134	+		CCNA_03207	0.46	-0.0
3,370,134	+		CCNA_03207	0.46	+0.9
3,370,142	-		CCNA_03207	0.47	-1.1
3,370,236	+		CCNA_03207	0.58	+0.1
3,370,236	+		CCNA_03207	0.58	+0.6
3,370,236	+		CCNA_03207	0.58	+0.2
3,370,293	+		CCNA_03207	0.65	+0.5
3,370,299	-		CCNA_03207	0.66	-0.9
3,370,299	-		CCNA_03207	0.66	-0.1
3,370,300	+		CCNA_03207	0.66	+0.4
3,370,301	-		CCNA_03207	0.66	-0.4
3,370,307	+		CCNA_03207	0.67	+0.4
3,370,307	+		CCNA_03207	0.67	+0.7
3,370,308	-		CCNA_03207	0.67	-0.1
3,370,308	-		CCNA_03207	0.67	-2.1
3,370,310	+		CCNA_03207	0.67	+0.4
3,370,315	-		CCNA_03207	0.68	-0.6
3,370,327	+		CCNA_03207	0.69	+0.3
3,370,327	+		CCNA_03207	0.69	+0.1
3,370,327	+		CCNA_03207	0.69	+0.6
3,370,335	-		CCNA_03207	0.70	-0.4
3,370,352	+		CCNA_03207	0.72	+0.5
3,370,393	-		CCNA_03207	0.77	-1.9
3,370,416	-		CCNA_03207	0.80	-2.6
3,370,440	+		CCNA_03207	0.83	+2.3
3,370,523	+				+0.3
3,370,529	-				-2.7
3,370,575	-				-0.1
3,370,588	+				+0.9
3,370,588	+				+0.5
3,370,588	-				-1.1
3,370,594	+				-0.1
3,370,600	+				-0.8
3,370,600	+				+2.0
3,370,600	+				+0.2
3,370,600	+				+1.0
3,370,600	+				+1.0
3,370,600	+				+0.4
3,370,600	+				-0.1
3,370,600	+				+0.9
3,370,600	+				+1.0
3,370,600	+				+0.8
3,370,600	+				+0.1
3,370,600	+				+1.3
3,370,600	+				+0.0
3,370,608	-				-1.6
3,370,608	-				-1.1
3,370,608	-				-1.7
3,370,608	-				-0.1
3,370,608	-				-1.5
3,370,613	-				+1.9
3,370,615	-				-0.1
3,370,633	+				-0.9
3,370,644	+				-0.8
3,370,644	+				-1.3
3,370,644	+				-1.2
3,370,644	+				-1.2
3,370,652	-				+0.2
3,370,652	-				-0.3
3,370,654	+				+0.4
3,370,660	+				+1.2
3,370,661	+				+0.0
3,370,668	-				+0.1
3,370,675	-				+0.3
3,370,701	+				+0.3
3,370,701	+				-1.4
3,370,709	-				-0.4
3,370,858	-		CCNA_03208	0.14	-0.6
3,370,908	+		CCNA_03208	0.20	-0.7
3,370,908	+		CCNA_03208	0.20	-0.8
3,370,953	+		CCNA_03208	0.25	-0.6
3,370,978	+		CCNA_03208	0.27	-0.6
3,370,978	+		CCNA_03208	0.27	-1.4
3,371,065	+		CCNA_03208	0.37	-0.4
3,371,065	+		CCNA_03208	0.37	-1.7
3,371,065	+		CCNA_03208	0.37	-0.8
3,371,065	+		CCNA_03208	0.37	+0.3
3,371,073	-		CCNA_03208	0.38	+0.7
3,371,073	-		CCNA_03208	0.38	-3.0
3,371,073	-				+1.7
3,371,117	-		CCNA_03208	0.42	-1.8
3,371,154	-		CCNA_03208	0.46	-0.8
3,371,154	-		CCNA_03208	0.46	-1.4
3,371,224	+		CCNA_03208	0.54	-1.1
3,371,245	-		CCNA_03208	0.56	-0.1
3,371,267	-		CCNA_03208	0.58	-2.2
3,371,293	-		CCNA_03208	0.61	-1.7
3,371,309	+		CCNA_03208	0.63	+0.7
3,371,309	+		CCNA_03208	0.63	+0.6
3,371,309	+		CCNA_03208	0.63	+1.0
3,371,311	+		CCNA_03208	0.63	-1.3
3,371,317	-		CCNA_03208	0.64	-0.3
3,371,317	-		CCNA_03208	0.64	-0.7
3,371,317	-		CCNA_03208	0.64	-1.3
3,371,317	-		CCNA_03208	0.64	-1.5
3,371,317	-		CCNA_03208	0.64	+1.3
3,371,317	-		CCNA_03208	0.64	-0.3
3,371,325	+		CCNA_03208	0.65	+0.8
3,371,329	-		CCNA_03208	0.65	-0.7
3,371,338	-		CCNA_03208	0.66	-0.4
3,371,351	+		CCNA_03208	0.67	-0.7
3,371,363	-		CCNA_03208	0.69	-0.4
3,371,388	-		CCNA_03208	0.71	-0.7
3,371,419	-		CCNA_03208	0.75	-1.1
3,371,527	-		CCNA_03208	0.86	-2.0
3,371,560	+		CCNA_03208	0.90	-0.3
3,371,560	+		CCNA_03208	0.90	+0.7
3,371,560	+		CCNA_03208	0.90	+1.0
3,371,561	-		CCNA_03208	0.90	+0.3
3,371,561	-		CCNA_03208	0.90	+0.1
3,371,567	+				-0.3
3,371,622	+				+0.2
3,371,629	+				+1.0
3,371,629	+				-1.8
3,371,637	-				-2.4
3,371,645	-				-0.3
3,371,668	+				+0.3
3,371,739	+				+1.5
3,371,747	-				-1.8
3,371,749	+				+1.3
3,371,749	+				+0.7
3,371,749	+				+1.3
3,371,757	-				-2.2
3,371,758	+				+0.7
3,371,766	-				-1.4
3,371,772	-				+1.1
3,371,795	+				+1.3
3,371,803	-				+1.0
3,371,803	-				+1.0
3,371,803	-				+1.5
3,371,805	+				-0.9
3,371,813	-		CCNA_03209	0.10	-0.7
3,371,813	-		CCNA_03209	0.10	+0.3
3,371,825	-		CCNA_03209	0.11	-1.4
3,371,869	+		CCNA_03209	0.15	-0.4
3,371,877	-		CCNA_03209	0.16	-2.0
3,371,907	+		CCNA_03209	0.18	-0.0
3,371,907	+		CCNA_03209	0.18	-1.7
3,371,918	+		CCNA_03209	0.19	+0.6
3,371,926	-		CCNA_03209	0.20	+0.9
3,371,930	+		CCNA_03209	0.20	-2.3
3,371,949	-		CCNA_03209	0.22	-1.2
3,371,953	-		CCNA_03209	0.22	-0.7
3,371,959	-		CCNA_03209	0.22	-1.4
3,371,988	+		CCNA_03209	0.25	-0.1
3,372,028	-		CCNA_03209	0.28	-1.3
3,372,074	-		CCNA_03209	0.32	-1.5
3,372,098	+		CCNA_03209	0.34	+0.3
3,372,100	-		CCNA_03209	0.34	-1.2
3,372,100	-		CCNA_03209	0.34	+0.8
3,372,121	+		CCNA_03209	0.36	-0.0
3,372,129	-		CCNA_03209	0.36	-3.4
3,372,131	+		CCNA_03209	0.36	-0.6
3,372,144	+		CCNA_03209	0.38	+1.7
3,372,145	+		CCNA_03209	0.38	-1.3
3,372,168	+		CCNA_03209	0.39	-0.8
3,372,178	-		CCNA_03209	0.40	-0.9
3,372,204	-		CCNA_03209	0.42	-0.9
3,372,239	-		CCNA_03209	0.45	-1.3
3,372,255	-		CCNA_03209	0.47	-0.4
3,372,260	-		CCNA_03209	0.47	-0.4
3,372,267	-		CCNA_03209	0.48	-0.8
3,372,282	+		CCNA_03209	0.49	-0.4
3,372,348	+		CCNA_03209	0.54	-0.1
3,372,390	-		CCNA_03209	0.58	+1.3
3,372,430	-		CCNA_03209	0.61	-1.6
3,372,460	-		CCNA_03209	0.63	-0.6
3,372,533	-		CCNA_03209	0.69	-1.0
3,372,537	+		CCNA_03209	0.70	-0.9
3,372,542	+		CCNA_03209	0.70	+1.6
3,372,563	+		CCNA_03209	0.72	+1.3
3,372,582	+		CCNA_03209	0.73	-0.8
3,372,587	+		CCNA_03209	0.74	+1.6
3,372,590	-		CCNA_03209	0.74	-0.4
3,372,590	-		CCNA_03209	0.74	+1.4
3,372,590	-		CCNA_03209	0.74	+0.8
3,372,590	-		CCNA_03209	0.74	-0.4
3,372,590	-		CCNA_03209	0.74	+2.3
3,372,590	-		CCNA_03209	0.74	-2.3
3,372,601	+		CCNA_03209	0.75	+0.4
3,372,639	+		CCNA_03209	0.78	-1.0
3,372,646	+		CCNA_03209	0.79	-0.7