Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01875

Experiment: PYE with Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Spectinomycin 0.025 mg/ml
2,012,226	+				-1.5
2,012,271	+				-1.7
2,012,271	+				-0.3
2,012,274	+				+0.5
2,012,279	-				-0.8
2,012,279	-				-0.3
2,012,341	-				-1.0
2,012,476	-				-1.4
2,012,476	-				-2.6
2,012,556	-				-0.6
2,012,556	-				-1.0
2,012,579	-				+0.3
2,012,587	-				+0.5
2,012,604	+				-1.9
2,012,650	+				-0.2
2,012,702	-				-1.3
2,012,709	+				-3.5
2,012,733	+				-1.0
2,012,733	+				-1.3
2,012,748	+				-0.6
2,012,764	+				-0.7
2,012,774	-				-0.0
2,012,803	+				-0.9
2,012,834	+				-1.5
2,012,842	-				-1.0
2,012,842	-				-1.4
2,012,848	+				-0.5
2,012,870	-				-1.6
2,012,926	-				-0.6
2,013,019	+		CCNA_01875	0.16	+0.1
2,013,021	-		CCNA_01875	0.16	-0.4
2,013,025	+		CCNA_01875	0.16	-1.8
2,013,087	+		CCNA_01875	0.22	-2.6
2,013,128	-		CCNA_01875	0.25	-0.3
2,013,183	-		CCNA_01875	0.30	+0.4
2,013,195	+		CCNA_01875	0.31	-1.2
2,013,213	+		CCNA_01875	0.33	-0.8
2,013,240	+		CCNA_01875	0.35	+1.0
2,013,243	-		CCNA_01875	0.35	-0.4
2,013,248	-		CCNA_01875	0.36	-0.3
2,013,248	-		CCNA_01875	0.36	-0.9
2,013,248	-		CCNA_01875	0.36	-0.8
2,013,253	-		CCNA_01875	0.36	-1.2
2,013,284	-		CCNA_01875	0.39	+1.0
2,013,284	-		CCNA_01875	0.39	-0.5
2,013,284	-		CCNA_01875	0.39	-0.8
2,013,284	-		CCNA_01875	0.39	-0.3
2,013,294	-		CCNA_01875	0.40	-0.2
2,013,310	-		CCNA_01875	0.41	-1.7
2,013,315	-		CCNA_01875	0.42	-0.6
2,013,316	+		CCNA_01875	0.42	-2.2
2,013,331	-		CCNA_01875	0.43	-0.9
2,013,334	-		CCNA_01875	0.43	-0.9
2,013,343	+		CCNA_01875	0.44	-0.0
2,013,348	+		CCNA_01875	0.45	-1.7
2,013,458	+		CCNA_01875	0.54	+1.7
2,013,481	-		CCNA_01875	0.56	+0.7
2,013,495	+		CCNA_01875	0.57	-0.2
2,013,495	+		CCNA_01875	0.57	-0.0
2,013,495	+		CCNA_01875	0.57	-0.3
2,013,524	+		CCNA_01875	0.60	+1.1
2,013,532	-		CCNA_01875	0.61	+0.5
2,013,544	-		CCNA_01875	0.62	-1.5
2,013,583	+		CCNA_01875	0.65	-1.0
2,013,621	+		CCNA_01875	0.68	-1.8
2,013,621	+		CCNA_01875	0.68	-1.1
2,013,621	+		CCNA_01875	0.68	-1.0
2,013,629	-		CCNA_01875	0.69	-0.0
2,013,634	+		CCNA_01875	0.69	-2.4
2,013,674	+		CCNA_01875	0.73	+2.0
2,013,731	+		CCNA_01875	0.78	-0.8
2,013,787	+		CCNA_01875	0.83	+0.1
2,013,810	-		CCNA_01875	0.85	+1.0
2,013,837	+		CCNA_01875	0.87	-2.5
2,013,840	-		CCNA_01875	0.87	-2.1
2,013,845	-		CCNA_01875	0.88	-1.5
2,013,870	-				+0.5
2,013,952	-				+1.0
2,013,986	-				-1.2
2,014,020	+				+0.1
2,014,045	-				-0.7
2,014,045	-				+0.1
2,014,045	-				+0.1
2,014,065	-				-0.8
2,014,118	-				+0.8
2,014,142	-				-0.2
2,014,146	+				-0.0
2,014,175	-				-1.7
2,014,182	-				-2.2
2,014,221	+		CCNA_01876	0.10	-0.2
2,014,265	-		CCNA_01876	0.13	+0.0
2,014,265	-		CCNA_01876	0.13	+0.1
2,014,285	-		CCNA_01876	0.14	-1.7
2,014,308	-		CCNA_01876	0.16	-0.1
2,014,308	-		CCNA_01876	0.16	+1.2
2,014,359	+		CCNA_01876	0.19	-1.2
2,014,369	+		CCNA_01876	0.19	-1.4
2,014,391	-		CCNA_01876	0.21	-3.0
2,014,495	+		CCNA_01876	0.27	-0.4
2,014,495	+				+0.3
2,014,495	+		CCNA_01876	0.27	-1.6
2,014,546	+		CCNA_01876	0.30	-1.5
2,014,604	+		CCNA_01876	0.33	+0.3
2,014,649	+		CCNA_01876	0.36	+0.7
2,014,649	+		CCNA_01876	0.36	-0.7
2,014,649	+		CCNA_01876	0.36	+0.4
2,014,649	+		CCNA_01876	0.36	-1.6
2,014,657	-		CCNA_01876	0.37	-0.6
2,014,683	+		CCNA_01876	0.38	-1.1
2,014,689	-		CCNA_01876	0.38	-0.5
2,014,691	-		CCNA_01876	0.39	+1.0
2,014,767	+		CCNA_01876	0.43	-0.4
2,014,771	+		CCNA_01876	0.43	-1.2
2,014,775	-		CCNA_01876	0.44	-0.5
2,014,827	-		CCNA_01876	0.47	+0.7
2,014,906	+		CCNA_01876	0.51	-1.9
2,014,918	+		CCNA_01876	0.52	-0.4