Experiment: syringaldehyde 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_623 and Ac3H11_624 are separated by 110 nucleotides Ac3H11_624 and Ac3H11_625 are separated by 176 nucleotides Ac3H11_625 and Ac3H11_626 overlap by 2 nucleotides
Ac3H11_623 - Permeases of the major facilitator superfamily, at 62,652 to 63,863
_623
Ac3H11_624 - Uncharacterized protein conserved in bacteria, at 63,974 to 64,573
_624
Ac3H11_625 - hypothetical protein, at 64,750 to 64,881
_625
Ac3H11_626 - putative membrane transport protein, at 64,880 to 66,013
_626
Position (kb) 63
64
65 Strain fitness (log2 ratio) -2
-1
0
1 at 63.180 kb on + strand, within Ac3H11_623 at 63.180 kb on + strand, within Ac3H11_623 at 63.180 kb on + strand, within Ac3H11_623 at 63.180 kb on + strand, within Ac3H11_623 at 63.180 kb on + strand, within Ac3H11_623 at 63.180 kb on + strand, within Ac3H11_623 at 63.181 kb on - strand, within Ac3H11_623 at 63.181 kb on - strand, within Ac3H11_623 at 63.181 kb on - strand, within Ac3H11_623 at 63.672 kb on + strand, within Ac3H11_623 at 63.672 kb on + strand, within Ac3H11_623 at 63.673 kb on - strand, within Ac3H11_623 at 63.871 kb on - strand at 63.999 kb on + strand at 63.999 kb on + strand at 64.186 kb on - strand, within Ac3H11_624 at 64.649 kb on + strand at 64.689 kb on + strand at 64.689 kb on + strand at 64.689 kb on + strand at 64.690 kb on - strand at 64.690 kb on - strand at 64.719 kb on + strand at 64.719 kb on + strand at 64.719 kb on + strand at 64.719 kb on + strand at 64.719 kb on + strand at 64.719 kb on + strand at 64.719 kb on + strand at 64.720 kb on - strand at 64.922 kb on + strand at 64.922 kb on + strand at 64.922 kb on + strand at 64.923 kb on - strand at 64.923 kb on - strand at 64.977 kb on - strand at 64.997 kb on + strand, within Ac3H11_626 at 64.997 kb on + strand, within Ac3H11_626 at 64.997 kb on + strand, within Ac3H11_626 at 64.997 kb on + strand, within Ac3H11_626 at 64.997 kb on + strand, within Ac3H11_626 at 64.997 kb on + strand, within Ac3H11_626 at 64.998 kb on - strand, within Ac3H11_626 at 64.998 kb on - strand, within Ac3H11_626 at 65.423 kb on + strand, within Ac3H11_626 at 65.423 kb on + strand, within Ac3H11_626 at 65.424 kb on - strand, within Ac3H11_626 at 65.424 kb on - strand, within Ac3H11_626 at 65.424 kb on - strand, within Ac3H11_626
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 2.5 mM remove 63,180 + Ac3H11_623 0.44 -0.8 63,180 + Ac3H11_623 0.44 -0.3 63,180 + Ac3H11_623 0.44 +0.3 63,180 + Ac3H11_623 0.44 -0.9 63,180 + Ac3H11_623 0.44 -1.9 63,180 + Ac3H11_623 0.44 +0.4 63,181 - Ac3H11_623 0.44 -0.7 63,181 - Ac3H11_623 0.44 -1.1 63,181 - Ac3H11_623 0.44 +0.1 63,672 + Ac3H11_623 0.84 -0.5 63,672 + Ac3H11_623 0.84 +0.3 63,673 - Ac3H11_623 0.84 +0.0 63,871 - +0.9 63,999 + +0.5 63,999 + +0.3 64,186 - Ac3H11_624 0.35 +0.6 64,649 + +0.0 64,689 + +0.3 64,689 + -0.4 64,689 + +0.9 64,690 - -0.2 64,690 - +0.5 64,719 + -1.2 64,719 + +1.5 64,719 + -1.1 64,719 + -0.4 64,719 + +0.3 64,719 + -0.0 64,719 + -1.4 64,720 - +0.6 64,922 + -1.8 64,922 + +0.3 64,922 + +0.4 64,923 - +1.5 64,923 - -1.1 64,977 - +0.4 64,997 + Ac3H11_626 0.10 +1.5 64,997 + Ac3H11_626 0.10 +0.4 64,997 + Ac3H11_626 0.10 +0.0 64,997 + Ac3H11_626 0.10 -0.3 64,997 + Ac3H11_626 0.10 -1.8 64,997 + Ac3H11_626 0.10 +0.0 64,998 - Ac3H11_626 0.10 -1.6 64,998 - Ac3H11_626 0.10 +0.4 65,423 + Ac3H11_626 0.48 -0.6 65,423 + Ac3H11_626 0.48 +1.1 65,424 - Ac3H11_626 0.48 -0.8 65,424 - Ac3H11_626 0.48 -0.1 65,424 - Ac3H11_626 0.48 +0.6
Or see this region's nucleotide sequence