Experiment: syringaldehyde 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_504 and Ac3H11_505 are separated by 125 nucleotides Ac3H11_505 and Ac3H11_506 are separated by 184 nucleotides Ac3H11_506 and Ac3H11_507 are separated by 87 nucleotides
Ac3H11_504 - FIG00348850: hypothetical protein, at 200,091 to 200,912
_504
Ac3H11_505 - Transcriptional regulator, TetR family, at 201,038 to 201,643
_505
Ac3H11_506 - biphenyl-2,3-diol 1,2-dioxygenase III-related protein, at 201,828 to 202,214
_506
Ac3H11_507 - Thymidine phosphorylase (EC 2.4.2.4), at 202,302 to 204,578
_507
Position (kb) 201
202 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 200.113 kb on + strand at 200.113 kb on + strand at 200.113 kb on + strand at 200.114 kb on - strand at 200.114 kb on - strand at 200.191 kb on + strand, within Ac3H11_504 at 200.192 kb on - strand, within Ac3H11_504 at 200.192 kb on - strand, within Ac3H11_504 at 200.398 kb on + strand, within Ac3H11_504 at 200.398 kb on + strand, within Ac3H11_504 at 200.398 kb on + strand, within Ac3H11_504 at 200.399 kb on - strand, within Ac3H11_504 at 200.399 kb on - strand, within Ac3H11_504 at 200.952 kb on + strand at 200.952 kb on + strand at 200.953 kb on - strand at 200.953 kb on - strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.977 kb on - strand at 200.998 kb on - strand at 201.007 kb on + strand at 201.007 kb on + strand at 201.008 kb on - strand at 201.011 kb on + strand at 201.027 kb on + strand at 201.128 kb on + strand, within Ac3H11_505 at 201.128 kb on + strand, within Ac3H11_505 at 201.128 kb on + strand, within Ac3H11_505 at 201.129 kb on - strand, within Ac3H11_505 at 201.188 kb on + strand, within Ac3H11_505 at 201.188 kb on + strand, within Ac3H11_505 at 201.188 kb on + strand, within Ac3H11_505 at 201.188 kb on + strand, within Ac3H11_505 at 201.188 kb on + strand, within Ac3H11_505 at 201.189 kb on - strand, within Ac3H11_505 at 201.189 kb on - strand, within Ac3H11_505 at 201.230 kb on + strand, within Ac3H11_505 at 201.230 kb on + strand, within Ac3H11_505 at 201.231 kb on - strand, within Ac3H11_505 at 201.231 kb on - strand, within Ac3H11_505 at 201.231 kb on - strand, within Ac3H11_505 at 201.326 kb on + strand, within Ac3H11_505 at 201.326 kb on + strand, within Ac3H11_505 at 201.327 kb on - strand, within Ac3H11_505 at 201.831 kb on + strand at 201.831 kb on + strand at 201.831 kb on + strand at 201.871 kb on + strand, within Ac3H11_506 at 201.871 kb on + strand, within Ac3H11_506 at 201.871 kb on + strand, within Ac3H11_506 at 201.871 kb on + strand, within Ac3H11_506 at 201.871 kb on + strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.872 kb on - strand, within Ac3H11_506 at 201.875 kb on + strand, within Ac3H11_506 at 201.875 kb on + strand, within Ac3H11_506 at 201.875 kb on + strand, within Ac3H11_506 at 201.875 kb on + strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.876 kb on - strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.877 kb on + strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506 at 201.878 kb on - strand, within Ac3H11_506 at 202.094 kb on - strand, within Ac3H11_506 at 202.141 kb on + strand, within Ac3H11_506 at 202.141 kb on + strand, within Ac3H11_506 at 202.141 kb on + strand, within Ac3H11_506 at 202.141 kb on + strand, within Ac3H11_506 at 202.267 kb on + strand at 202.268 kb on - strand at 202.278 kb on + strand at 202.278 kb on + strand at 202.298 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 2.5 mM remove 200,113 + -0.4 200,113 + +0.0 200,113 + +0.4 200,114 - +1.5 200,114 - -0.6 200,191 + Ac3H11_504 0.12 -0.5 200,192 - Ac3H11_504 0.12 -0.5 200,192 - Ac3H11_504 0.12 +0.1 200,398 + Ac3H11_504 0.37 +0.1 200,398 + Ac3H11_504 0.37 -0.4 200,398 + Ac3H11_504 0.37 -0.3 200,399 - Ac3H11_504 0.37 +0.0 200,399 - Ac3H11_504 0.37 +0.1 200,952 + -0.4 200,952 + -1.0 200,953 - -3.1 200,953 - -0.6 200,976 + -0.2 200,976 + -0.8 200,976 + -0.7 200,976 + +2.2 200,976 + +0.1 200,976 + -1.1 200,977 - -0.1 200,998 - +0.5 201,007 + -0.5 201,007 + +0.6 201,008 - -0.5 201,011 + -1.6 201,027 + -0.2 201,128 + Ac3H11_505 0.15 -1.2 201,128 + Ac3H11_505 0.15 -1.2 201,128 + Ac3H11_505 0.15 -2.5 201,129 - Ac3H11_505 0.15 -0.9 201,188 + Ac3H11_505 0.25 -0.7 201,188 + Ac3H11_505 0.25 +0.3 201,188 + Ac3H11_505 0.25 -0.9 201,188 + Ac3H11_505 0.25 -2.9 201,188 + Ac3H11_505 0.25 -1.7 201,189 - Ac3H11_505 0.25 -1.1 201,189 - Ac3H11_505 0.25 +0.2 201,230 + Ac3H11_505 0.32 +1.1 201,230 + Ac3H11_505 0.32 +0.9 201,231 - Ac3H11_505 0.32 -1.4 201,231 - Ac3H11_505 0.32 -0.7 201,231 - Ac3H11_505 0.32 +0.9 201,326 + Ac3H11_505 0.48 -0.9 201,326 + Ac3H11_505 0.48 -1.1 201,327 - Ac3H11_505 0.48 -1.9 201,831 + -0.2 201,831 + +1.2 201,831 + -0.6 201,871 + Ac3H11_506 0.11 -0.5 201,871 + Ac3H11_506 0.11 -0.0 201,871 + Ac3H11_506 0.11 +1.3 201,871 + Ac3H11_506 0.11 -0.5 201,871 + Ac3H11_506 0.11 -0.7 201,872 - Ac3H11_506 0.11 +0.0 201,872 - Ac3H11_506 0.11 +0.1 201,872 - Ac3H11_506 0.11 +1.1 201,872 - Ac3H11_506 0.11 +0.7 201,872 - Ac3H11_506 0.11 -0.4 201,872 - Ac3H11_506 0.11 -0.3 201,872 - Ac3H11_506 0.11 -0.9 201,875 + Ac3H11_506 0.12 +0.9 201,875 + Ac3H11_506 0.12 +0.1 201,875 + Ac3H11_506 0.12 -0.3 201,875 + Ac3H11_506 0.12 +0.7 201,876 - Ac3H11_506 0.12 +0.7 201,876 - Ac3H11_506 0.12 -0.7 201,876 - Ac3H11_506 0.12 -0.6 201,876 - Ac3H11_506 0.12 -0.3 201,876 - Ac3H11_506 0.12 -1.3 201,876 - Ac3H11_506 0.12 -0.9 201,876 - Ac3H11_506 0.12 -0.3 201,876 - Ac3H11_506 0.12 +0.3 201,876 - Ac3H11_506 0.12 -1.4 201,876 - Ac3H11_506 0.12 -1.5 201,877 + Ac3H11_506 0.13 -2.6 201,877 + Ac3H11_506 0.13 +0.5 201,877 + Ac3H11_506 0.13 -1.1 201,877 + Ac3H11_506 0.13 +0.3 201,877 + Ac3H11_506 0.13 -0.4 201,877 + Ac3H11_506 0.13 -0.2 201,877 + Ac3H11_506 0.13 +0.6 201,877 + Ac3H11_506 0.13 +0.2 201,878 - Ac3H11_506 0.13 -0.4 201,878 - Ac3H11_506 0.13 +0.8 201,878 - Ac3H11_506 0.13 -0.2 201,878 - Ac3H11_506 0.13 +0.9 201,878 - Ac3H11_506 0.13 +0.2 201,878 - Ac3H11_506 0.13 -0.8 202,094 - Ac3H11_506 0.69 +0.1 202,141 + Ac3H11_506 0.81 +0.8 202,141 + Ac3H11_506 0.81 +0.4 202,141 + Ac3H11_506 0.81 +0.8 202,141 + Ac3H11_506 0.81 -0.1 202,267 + -0.1 202,268 - -0.4 202,278 + +2.5 202,278 + +1.6 202,298 + +1.9
Or see this region's nucleotide sequence