Experiment: syringaldehyde 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2462 and Ac3H11_2463 are separated by 150 nucleotides Ac3H11_2463 and Ac3H11_2464 overlap by 4 nucleotides Ac3H11_2464 and Ac3H11_2465 are separated by 84 nucleotides
Ac3H11_2462 - Protein phosphatase 2C-like, at 726,565 to 727,371
_2462
Ac3H11_2463 - Translation initiation factor 2 (IF-2; GTPase), at 727,522 to 728,226
_2463
Ac3H11_2464 - ATPase component BioM of energizing module of biotin ECF transporter, at 728,223 to 729,320
_2464
Ac3H11_2465 - Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4), at 729,405 to 730,832
_2465
Position (kb) 728
729
730 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 727.378 kb on + strand at 727.378 kb on + strand at 727.378 kb on + strand at 727.378 kb on + strand at 727.378 kb on + strand at 727.379 kb on - strand at 727.379 kb on - strand at 727.379 kb on - strand at 727.471 kb on + strand at 727.471 kb on + strand at 727.471 kb on + strand at 727.471 kb on + strand at 727.471 kb on + strand at 727.471 kb on + strand at 727.471 kb on + strand at 727.471 kb on + strand at 727.471 kb on + strand at 727.471 kb on + strand at 727.472 kb on - strand at 727.472 kb on - strand at 727.472 kb on - strand at 727.472 kb on - strand at 727.472 kb on - strand at 727.472 kb on - strand at 727.472 kb on - strand at 727.472 kb on - strand at 727.476 kb on + strand at 727.476 kb on + strand at 727.476 kb on + strand at 727.476 kb on + strand at 727.476 kb on + strand at 727.476 kb on + strand at 727.476 kb on + strand at 727.477 kb on - strand at 727.477 kb on - strand at 727.477 kb on - strand at 727.477 kb on - strand at 727.477 kb on - strand at 727.477 kb on - strand at 728.021 kb on + strand, within Ac3H11_2463 at 728.021 kb on + strand, within Ac3H11_2463 at 728.021 kb on + strand, within Ac3H11_2463 at 728.021 kb on + strand, within Ac3H11_2463 at 728.021 kb on + strand, within Ac3H11_2463 at 728.021 kb on + strand, within Ac3H11_2463 at 728.022 kb on - strand, within Ac3H11_2463 at 728.022 kb on - strand, within Ac3H11_2463 at 728.022 kb on - strand, within Ac3H11_2463 at 728.022 kb on - strand, within Ac3H11_2463 at 728.022 kb on - strand, within Ac3H11_2463 at 728.202 kb on + strand at 728.202 kb on + strand at 728.203 kb on - strand at 728.203 kb on - strand at 728.203 kb on - strand at 728.339 kb on - strand, within Ac3H11_2464 at 728.339 kb on - strand, within Ac3H11_2464 at 728.392 kb on + strand, within Ac3H11_2464 at 728.393 kb on - strand, within Ac3H11_2464 at 728.393 kb on - strand, within Ac3H11_2464 at 728.393 kb on - strand, within Ac3H11_2464 at 728.452 kb on + strand, within Ac3H11_2464 at 728.453 kb on - strand, within Ac3H11_2464 at 728.453 kb on - strand, within Ac3H11_2464 at 728.453 kb on - strand, within Ac3H11_2464 at 728.453 kb on - strand, within Ac3H11_2464 at 728.693 kb on - strand, within Ac3H11_2464 at 728.922 kb on + strand, within Ac3H11_2464 at 728.953 kb on + strand, within Ac3H11_2464 at 728.953 kb on + strand, within Ac3H11_2464 at 729.133 kb on + strand, within Ac3H11_2464 at 729.133 kb on + strand, within Ac3H11_2464 at 729.205 kb on + strand, within Ac3H11_2464 at 729.206 kb on - strand, within Ac3H11_2464 at 729.282 kb on - strand at 729.282 kb on - strand at 729.302 kb on - strand at 729.302 kb on - strand at 729.302 kb on - strand at 729.302 kb on - strand at 729.359 kb on - strand at 729.372 kb on + strand at 729.372 kb on + strand at 729.372 kb on + strand at 729.373 kb on - strand at 729.373 kb on - strand at 729.373 kb on - strand at 729.404 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 2.5 mM remove 727,378 + +1.9 727,378 + +1.1 727,378 + +0.6 727,378 + -0.5 727,378 + -1.0 727,379 - +1.2 727,379 - -0.1 727,379 - -0.1 727,471 + -2.0 727,471 + +0.8 727,471 + +0.2 727,471 + -0.8 727,471 + +0.5 727,471 + +0.4 727,471 + -0.2 727,471 + -0.9 727,471 + -0.6 727,471 + -0.2 727,472 - +0.3 727,472 - +0.6 727,472 - +0.8 727,472 - -0.7 727,472 - +0.3 727,472 - -0.2 727,472 - -1.5 727,472 - -0.4 727,476 + -0.4 727,476 + +1.3 727,476 + +0.2 727,476 + -0.5 727,476 + +0.6 727,476 + -0.0 727,476 + +0.0 727,477 - -0.6 727,477 - -0.8 727,477 - -0.8 727,477 - +0.9 727,477 - +0.2 727,477 - -1.1 728,021 + Ac3H11_2463 0.71 -0.1 728,021 + Ac3H11_2463 0.71 -0.0 728,021 + Ac3H11_2463 0.71 -1.1 728,021 + Ac3H11_2463 0.71 +0.3 728,021 + Ac3H11_2463 0.71 -0.9 728,021 + Ac3H11_2463 0.71 +0.6 728,022 - Ac3H11_2463 0.71 +0.2 728,022 - Ac3H11_2463 0.71 +0.0 728,022 - Ac3H11_2463 0.71 -1.0 728,022 - Ac3H11_2463 0.71 -0.2 728,022 - Ac3H11_2463 0.71 -0.2 728,202 + +0.8 728,202 + +0.6 728,203 - +1.1 728,203 - +0.1 728,203 - -1.6 728,339 - Ac3H11_2464 0.11 +0.3 728,339 - Ac3H11_2464 0.11 -1.1 728,392 + Ac3H11_2464 0.15 -0.3 728,393 - Ac3H11_2464 0.15 +0.3 728,393 - Ac3H11_2464 0.15 -0.5 728,393 - Ac3H11_2464 0.15 -0.5 728,452 + Ac3H11_2464 0.21 -1.1 728,453 - Ac3H11_2464 0.21 -1.6 728,453 - Ac3H11_2464 0.21 -1.4 728,453 - Ac3H11_2464 0.21 -0.1 728,453 - Ac3H11_2464 0.21 -0.1 728,693 - Ac3H11_2464 0.43 -1.5 728,922 + Ac3H11_2464 0.64 -2.5 728,953 + Ac3H11_2464 0.66 -3.0 728,953 + Ac3H11_2464 0.66 -1.8 729,133 + Ac3H11_2464 0.83 -0.1 729,133 + Ac3H11_2464 0.83 +0.9 729,205 + Ac3H11_2464 0.89 -1.0 729,206 - Ac3H11_2464 0.90 +0.6 729,282 - +0.3 729,282 - -1.1 729,302 - -0.6 729,302 - +0.0 729,302 - -1.3 729,302 - -0.8 729,359 - +0.2 729,372 + -0.4 729,372 + +0.9 729,372 + -0.1 729,373 - -0.3 729,373 - +0.2 729,373 - +0.3 729,404 - +0.4
Or see this region's nucleotide sequence