Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31130 and AZOBR_RS31135 are separated by 279 nucleotides AZOBR_RS31135 and AZOBR_RS31140 are separated by 63 nucleotides
AZOBR_RS31130: AZOBR_RS31130 - membrane protein, at 348,197 to 348,904
_RS31130
AZOBR_RS31135: AZOBR_RS31135 - pyruvate phosphate dikinase, at 349,184 to 351,877
_RS31135
AZOBR_RS31140: AZOBR_RS31140 - beta-lactamase, at 351,941 to 353,023
_RS31140
Position (kb) 349
350
351
352 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 348.233 kb on + strand at 348.233 kb on + strand at 348.234 kb on - strand at 348.234 kb on - strand at 348.234 kb on - strand at 348.269 kb on + strand, within AZOBR_RS31130 at 348.270 kb on - strand, within AZOBR_RS31130 at 348.270 kb on - strand, within AZOBR_RS31130 at 348.434 kb on + strand, within AZOBR_RS31130 at 348.575 kb on + strand, within AZOBR_RS31130 at 348.575 kb on + strand, within AZOBR_RS31130 at 348.575 kb on + strand, within AZOBR_RS31130 at 348.602 kb on + strand, within AZOBR_RS31130 at 348.603 kb on - strand, within AZOBR_RS31130 at 348.603 kb on - strand, within AZOBR_RS31130 at 348.638 kb on + strand, within AZOBR_RS31130 at 348.639 kb on - strand, within AZOBR_RS31130 at 348.639 kb on - strand, within AZOBR_RS31130 at 348.671 kb on + strand, within AZOBR_RS31130 at 348.671 kb on + strand, within AZOBR_RS31130 at 348.672 kb on - strand, within AZOBR_RS31130 at 348.672 kb on - strand, within AZOBR_RS31130 at 348.987 kb on - strand at 348.987 kb on - strand at 348.987 kb on - strand at 349.017 kb on - strand at 349.161 kb on + strand at 349.161 kb on + strand at 349.214 kb on + strand at 349.355 kb on + strand at 349.355 kb on + strand at 349.356 kb on - strand at 349.362 kb on - strand at 349.379 kb on + strand at 349.757 kb on + strand, within AZOBR_RS31135 at 349.874 kb on + strand, within AZOBR_RS31135 at 349.875 kb on - strand, within AZOBR_RS31135 at 350.670 kb on - strand, within AZOBR_RS31135 at 351.266 kb on + strand, within AZOBR_RS31135 at 351.450 kb on - strand, within AZOBR_RS31135 at 351.530 kb on + strand, within AZOBR_RS31135 at 351.789 kb on - strand at 352.320 kb on - strand, within AZOBR_RS31140 at 352.425 kb on - strand, within AZOBR_RS31140 at 352.425 kb on - strand, within AZOBR_RS31140 at 352.425 kb on - strand, within AZOBR_RS31140 at 352.439 kb on + strand, within AZOBR_RS31140 at 352.637 kb on + strand, within AZOBR_RS31140 at 352.637 kb on + strand, within AZOBR_RS31140 at 352.637 kb on + strand, within AZOBR_RS31140 at 352.638 kb on - strand, within AZOBR_RS31140 at 352.856 kb on + strand, within AZOBR_RS31140
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 348,233 + -0.1 348,233 + +0.0 348,234 - -1.3 348,234 - +0.2 348,234 - -0.8 348,269 + AZOBR_RS31130 0.10 -0.0 348,270 - AZOBR_RS31130 0.10 +1.7 348,270 - AZOBR_RS31130 0.10 -1.0 348,434 + AZOBR_RS31130 0.33 +0.6 348,575 + AZOBR_RS31130 0.53 +0.4 348,575 + AZOBR_RS31130 0.53 +0.3 348,575 + AZOBR_RS31130 0.53 -0.3 348,602 + AZOBR_RS31130 0.57 -0.7 348,603 - AZOBR_RS31130 0.57 +0.6 348,603 - AZOBR_RS31130 0.57 +0.3 348,638 + AZOBR_RS31130 0.62 -0.1 348,639 - AZOBR_RS31130 0.62 +0.1 348,639 - AZOBR_RS31130 0.62 +0.4 348,671 + AZOBR_RS31130 0.67 -1.3 348,671 + AZOBR_RS31130 0.67 +0.4 348,672 - AZOBR_RS31130 0.67 +1.1 348,672 - AZOBR_RS31130 0.67 -0.3 348,987 - -0.7 348,987 - +0.6 348,987 - +0.7 349,017 - -0.5 349,161 + -2.5 349,161 + -1.3 349,214 + -4.4 349,355 + -4.2 349,355 + -5.5 349,356 - -2.2 349,362 - -1.9 349,379 + -0.5 349,757 + AZOBR_RS31135 0.21 -0.7 349,874 + AZOBR_RS31135 0.26 -2.7 349,875 - AZOBR_RS31135 0.26 -3.3 350,670 - AZOBR_RS31135 0.55 -5.6 351,266 + AZOBR_RS31135 0.77 -2.9 351,450 - AZOBR_RS31135 0.84 -3.1 351,530 + AZOBR_RS31135 0.87 -2.3 351,789 - -2.5 352,320 - AZOBR_RS31140 0.35 +0.6 352,425 - AZOBR_RS31140 0.45 +0.0 352,425 - AZOBR_RS31140 0.45 +0.6 352,425 - AZOBR_RS31140 0.45 +0.3 352,439 + AZOBR_RS31140 0.46 -1.5 352,637 + AZOBR_RS31140 0.64 -0.3 352,637 + AZOBR_RS31140 0.64 +0.2 352,637 + AZOBR_RS31140 0.64 -0.3 352,638 - AZOBR_RS31140 0.64 +0.2 352,856 + AZOBR_RS31140 0.84 -0.8
Or see this region's nucleotide sequence