Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS20575 and AZOBR_RS20580 are separated by 55 nucleotides AZOBR_RS20580 and AZOBR_RS20585 are separated by 26 nucleotides AZOBR_RS20585 and AZOBR_RS20590 are separated by 114 nucleotides
AZOBR_RS20575: AZOBR_RS20575 - aspartate carbamoyltransferase, at 1,381,115 to 1,382,077
_RS20575
AZOBR_RS20580: AZOBR_RS20580 - membrane protein, at 1,382,133 to 1,382,639
_RS20580
AZOBR_RS20585: AZOBR_RS20585 - hypothetical protein, at 1,382,666 to 1,383,022
_RS20585
AZOBR_RS20590: AZOBR_RS20590 - transcriptional regulator, at 1,383,137 to 1,384,006
_RS20590
Position (kb)
1382
1383 Strain fitness (log2 ratio)
-2
-1
0
1 at 1381.330 kb on - strand, within AZOBR_RS20575 at 1381.336 kb on - strand, within AZOBR_RS20575 at 1381.336 kb on - strand, within AZOBR_RS20575 at 1381.336 kb on - strand, within AZOBR_RS20575 at 1381.357 kb on - strand, within AZOBR_RS20575 at 1382.089 kb on - strand at 1382.091 kb on - strand at 1382.091 kb on - strand at 1382.091 kb on - strand at 1382.091 kb on - strand at 1382.091 kb on - strand at 1382.935 kb on - strand, within AZOBR_RS20585 at 1383.183 kb on + strand at 1383.183 kb on + strand at 1383.184 kb on - strand at 1383.204 kb on + strand at 1383.204 kb on + strand at 1383.204 kb on + strand at 1383.205 kb on - strand at 1383.205 kb on - strand at 1383.205 kb on - strand at 1383.208 kb on - strand at 1383.213 kb on + strand at 1383.213 kb on + strand at 1383.214 kb on - strand at 1383.214 kb on - strand at 1383.214 kb on - strand at 1383.214 kb on - strand at 1383.214 kb on - strand at 1383.214 kb on - strand at 1383.420 kb on + strand, within AZOBR_RS20590 at 1383.420 kb on + strand, within AZOBR_RS20590 at 1383.510 kb on + strand, within AZOBR_RS20590 at 1383.510 kb on + strand, within AZOBR_RS20590 at 1383.511 kb on - strand, within AZOBR_RS20590
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 1,381,330 - AZOBR_RS20575 0.22 -0.9 1,381,336 - AZOBR_RS20575 0.23 -0.9 1,381,336 - AZOBR_RS20575 0.23 -1.9 1,381,336 - AZOBR_RS20575 0.23 -1.7 1,381,357 - AZOBR_RS20575 0.25 -2.1 1,382,089 - -1.3 1,382,091 - -0.9 1,382,091 - -1.0 1,382,091 - -0.9 1,382,091 - -0.4 1,382,091 - -0.2 1,382,935 - AZOBR_RS20585 0.75 -0.2 1,383,183 + +0.4 1,383,183 + +1.4 1,383,184 - +0.2 1,383,204 + +0.2 1,383,204 + +0.8 1,383,204 + +1.5 1,383,205 - +0.0 1,383,205 - -0.5 1,383,205 - -0.1 1,383,208 - -0.1 1,383,213 + +0.2 1,383,213 + -0.5 1,383,214 - +1.3 1,383,214 - +0.6 1,383,214 - -0.0 1,383,214 - -0.4 1,383,214 - +1.3 1,383,214 - -0.0 1,383,420 + AZOBR_RS20590 0.33 -0.1 1,383,420 + AZOBR_RS20590 0.33 -0.1 1,383,510 + AZOBR_RS20590 0.43 +0.1 1,383,510 + AZOBR_RS20590 0.43 -0.4 1,383,511 - AZOBR_RS20590 0.43 +0.6
Or see this region's nucleotide sequence