Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS07455

Experiment: L-Asparagine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS07445 and AZOBR_RS07450 are separated by 17 nucleotidesAZOBR_RS07450 and AZOBR_RS07455 overlap by 4 nucleotidesAZOBR_RS07455 and AZOBR_RS07460 overlap by 4 nucleotidesAZOBR_RS07460 and AZOBR_RS07465 are separated by 169 nucleotides AZOBR_RS07445: AZOBR_RS07445 - GCN5 family acetyltransferase, at 1,568,288 to 1,568,767 _RS07445 AZOBR_RS07450: AZOBR_RS07450 - indole-3-glycerol-phosphate synthase, at 1,568,785 to 1,569,573 _RS07450 AZOBR_RS07455: AZOBR_RS07455 - anthranilate phosphoribosyltransferase, at 1,569,570 to 1,570,643 _RS07455 AZOBR_RS07460: AZOBR_RS07460 - anthranilate synthase, at 1,570,640 to 1,571,230 _RS07460 AZOBR_RS07465: AZOBR_RS07465 - hypothetical protein, at 1,571,400 to 1,571,864 _RS07465 Position (kb) 1569 1570 1571Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1568.660 kb on + strand, within AZOBR_RS07445at 1568.660 kb on + strand, within AZOBR_RS07445at 1568.661 kb on - strand, within AZOBR_RS07445at 1568.661 kb on - strand, within AZOBR_RS07445at 1568.661 kb on - strand, within AZOBR_RS07445at 1568.674 kb on - strand, within AZOBR_RS07445at 1569.257 kb on + strand, within AZOBR_RS07450at 1569.257 kb on + strandat 1569.258 kb on - strand, within AZOBR_RS07450at 1569.258 kb on - strand, within AZOBR_RS07450at 1569.258 kb on - strand, within AZOBR_RS07450at 1569.278 kb on + strand, within AZOBR_RS07450at 1569.278 kb on + strand, within AZOBR_RS07450at 1569.278 kb on + strand, within AZOBR_RS07450at 1569.278 kb on + strand, within AZOBR_RS07450at 1569.279 kb on - strand, within AZOBR_RS07450at 1570.345 kb on + strand, within AZOBR_RS07455at 1570.345 kb on + strand, within AZOBR_RS07455at 1570.346 kb on - strand, within AZOBR_RS07455at 1571.178 kb on + strandat 1571.193 kb on + strandat 1571.193 kb on + strandat 1571.209 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (N)
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1,568,660 + AZOBR_RS07445 0.78 -0.1
1,568,660 + AZOBR_RS07445 0.78 +0.3
1,568,661 - AZOBR_RS07445 0.78 -0.8
1,568,661 - AZOBR_RS07445 0.78 +0.4
1,568,661 - AZOBR_RS07445 0.78 +1.0
1,568,674 - AZOBR_RS07445 0.80 -0.4
1,569,257 + AZOBR_RS07450 0.60 +0.0
1,569,257 + -0.6
1,569,258 - AZOBR_RS07450 0.60 -2.8
1,569,258 - AZOBR_RS07450 0.60 -3.1
1,569,258 - AZOBR_RS07450 0.60 +1.0
1,569,278 + AZOBR_RS07450 0.62 -2.8
1,569,278 + AZOBR_RS07450 0.62 -3.1
1,569,278 + AZOBR_RS07450 0.62 -3.4
1,569,278 + AZOBR_RS07450 0.62 -2.0
1,569,279 - AZOBR_RS07450 0.63 -2.9
1,570,345 + AZOBR_RS07455 0.72 -0.2
1,570,345 + AZOBR_RS07455 0.72 -3.8
1,570,346 - AZOBR_RS07455 0.72 -3.4
1,571,178 + -5.2
1,571,193 + -1.6
1,571,193 + -1.6
1,571,209 - -2.4

Or see this region's nucleotide sequence