Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21420 and ABZR86_RS21425 are separated by 13 nucleotides ABZR86_RS21425 and ABZR86_RS21430 are separated by 4 nucleotides ABZR86_RS21430 and ABZR86_RS21435 are separated by 5 nucleotides
ABZR86_RS21420: ABZR86_RS21420 - alpha/beta fold hydrolase, at 249,760 to 250,602
_RS21420
ABZR86_RS21425: ABZR86_RS21425 - EamA family transporter, at 250,616 to 250,981
_RS21425
ABZR86_RS21430: ABZR86_RS21430 - EamA family transporter, at 250,986 to 251,438
_RS21430
ABZR86_RS21435: ABZR86_RS21435 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 251,444 to 252,646
_RS21435
Position (kb) 250
251 Strain fitness (log2 ratio) -2
-1
0
1 at 249.655 kb on + strand at 249.692 kb on + strand at 249.692 kb on + strand at 249.692 kb on + strand at 249.693 kb on - strand at 249.693 kb on - strand at 249.725 kb on - strand at 249.889 kb on + strand, within ABZR86_RS21420 at 249.890 kb on - strand, within ABZR86_RS21420 at 249.958 kb on + strand, within ABZR86_RS21420 at 250.096 kb on + strand, within ABZR86_RS21420 at 250.097 kb on - strand, within ABZR86_RS21420 at 250.138 kb on + strand, within ABZR86_RS21420 at 250.138 kb on + strand, within ABZR86_RS21420 at 250.139 kb on - strand, within ABZR86_RS21420 at 250.219 kb on + strand, within ABZR86_RS21420 at 250.330 kb on + strand, within ABZR86_RS21420 at 250.330 kb on + strand, within ABZR86_RS21420 at 250.331 kb on - strand, within ABZR86_RS21420 at 250.331 kb on - strand, within ABZR86_RS21420 at 250.489 kb on + strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 250.490 kb on - strand, within ABZR86_RS21420 at 251.668 kb on - strand, within ABZR86_RS21435 at 251.858 kb on + strand, within ABZR86_RS21435 at 251.972 kb on + strand, within ABZR86_RS21435 at 251.973 kb on - strand, within ABZR86_RS21435 at 251.973 kb on - strand, within ABZR86_RS21435
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.02 mg/ml remove 249,655 + +0.9 249,692 + -0.1 249,692 + -0.3 249,692 + +0.7 249,693 - -0.3 249,693 - +0.1 249,725 - -0.4 249,889 + ABZR86_RS21420 0.15 -0.4 249,890 - ABZR86_RS21420 0.15 -0.5 249,958 + ABZR86_RS21420 0.23 -0.3 250,096 + ABZR86_RS21420 0.40 -1.1 250,097 - ABZR86_RS21420 0.40 +1.7 250,138 + ABZR86_RS21420 0.45 -0.2 250,138 + ABZR86_RS21420 0.45 +0.3 250,139 - ABZR86_RS21420 0.45 -0.7 250,219 + ABZR86_RS21420 0.54 +0.8 250,330 + ABZR86_RS21420 0.68 -0.6 250,330 + ABZR86_RS21420 0.68 -0.3 250,331 - ABZR86_RS21420 0.68 -0.5 250,331 - ABZR86_RS21420 0.68 -1.0 250,489 + ABZR86_RS21420 0.86 -0.8 250,490 - ABZR86_RS21420 0.87 -1.1 250,490 - ABZR86_RS21420 0.87 -1.8 250,490 - ABZR86_RS21420 0.87 -0.1 250,490 - ABZR86_RS21420 0.87 -0.7 250,490 - ABZR86_RS21420 0.87 -1.2 251,668 - ABZR86_RS21435 0.19 -2.4 251,858 + ABZR86_RS21435 0.34 -2.4 251,972 + ABZR86_RS21435 0.44 -2.2 251,973 - ABZR86_RS21435 0.44 -1.9 251,973 - ABZR86_RS21435 0.44 -1.3
Or see this region's nucleotide sequence