Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS16420

Experiment: A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.02 mg/ml
3,707,901	+		ABZR86_RS16415	0.18	-0.3
3,707,931	+		ABZR86_RS16415	0.22	-0.2
3,707,931	+		ABZR86_RS16415	0.22	+0.4
3,707,931	+		ABZR86_RS16415	0.22	+0.1
3,707,931	+		ABZR86_RS16415	0.22	-0.5
3,707,932	-		ABZR86_RS16415	0.22	-0.9
3,707,994	+		ABZR86_RS16415	0.31	-0.4
3,707,994	+		ABZR86_RS16415	0.31	+0.2
3,707,995	-		ABZR86_RS16415	0.31	-0.5
3,707,995	-		ABZR86_RS16415	0.31	-0.1
3,707,995	-		ABZR86_RS16415	0.31	-0.8
3,707,995	-		ABZR86_RS16415	0.31	+0.2
3,707,995	-		ABZR86_RS16415	0.31	-0.1
3,708,069	+		ABZR86_RS16415	0.41	+0.0
3,708,070	-		ABZR86_RS16415	0.41	+0.4
3,708,070	-		ABZR86_RS16415	0.41	-0.1
3,708,111	+		ABZR86_RS16415	0.46	-0.7
3,708,213	+		ABZR86_RS16415	0.60	-0.7
3,708,214	-		ABZR86_RS16415	0.60	+0.6
3,708,243	+		ABZR86_RS16415	0.64	-0.2
3,708,243	+		ABZR86_RS16415	0.64	+0.1
3,708,244	-		ABZR86_RS16415	0.64	+0.3
3,708,244	-		ABZR86_RS16415	0.64	-0.6
3,708,244	-		ABZR86_RS16415	0.64	-0.4
3,708,244	-		ABZR86_RS16415	0.64	-0.6
3,708,355	+		ABZR86_RS16415	0.79	-0.5
3,708,355	+		ABZR86_RS16415	0.79	-0.1
3,708,355	+		ABZR86_RS16415	0.79	+0.1
3,708,355	+		ABZR86_RS16415	0.79	-0.3
3,708,355	+		ABZR86_RS16415	0.79	+0.2
3,708,355	+		ABZR86_RS16415	0.79	+1.6
3,708,355	+		ABZR86_RS16415	0.79	+0.2
3,708,355	+		ABZR86_RS16415	0.79	-0.5
3,708,355	+		ABZR86_RS16415	0.79	+0.6
3,708,355	+		ABZR86_RS16415	0.79	-0.1
3,708,355	+		ABZR86_RS16415	0.79	+0.3
3,708,355	+		ABZR86_RS16415	0.79	-0.9
3,708,356	-		ABZR86_RS16415	0.79	-0.1
3,708,356	-		ABZR86_RS16415	0.79	-0.5
3,708,356	-		ABZR86_RS16415	0.79	-0.2
3,708,356	-		ABZR86_RS16415	0.79	+0.3
3,708,356	-		ABZR86_RS16415	0.79	+0.2
3,708,356	-		ABZR86_RS16415	0.79	+0.0
3,708,356	-		ABZR86_RS16415	0.79	+0.3
3,708,405	+		ABZR86_RS16415	0.86	-0.2
3,708,406	-		ABZR86_RS16415	0.86	-0.2
3,708,406	-		ABZR86_RS16415	0.86	-0.3
3,708,459	+				+0.4
3,708,459	+				+1.0
3,708,459	+				+0.4
3,708,495	+				+0.2
3,708,495	+				-0.0
3,708,495	+				+0.0
3,708,495	+				-0.7
3,708,495	+				-0.5
3,708,495	+				+0.3
3,708,495	+				+0.2
3,708,495	+				-1.0
3,708,495	+				+0.9
3,708,495	+				+0.6
3,708,495	+				-0.7
3,708,496	-				+0.6
3,708,496	-				-0.3
3,708,496	-				-0.6
3,708,496	-				-0.2
3,708,496	-				+0.5
3,708,496	-				-0.1
3,708,680	+				-0.6
3,708,681	-				-0.5
3,708,681	-				+0.2
3,708,687	+				-1.2
3,708,687	+				+0.8
3,708,687	+				-0.3
3,708,688	-				-0.6
3,708,743	+				-0.3
3,708,744	-				-0.3
3,709,044	+		ABZR86_RS16420	0.66	+0.8
3,709,044	+		ABZR86_RS16420	0.66	-0.3
3,709,045	-		ABZR86_RS16420	0.66	+0.3
3,709,073	+		ABZR86_RS16420	0.74	-0.2
3,709,074	-		ABZR86_RS16420	0.75	+0.1
3,709,096	+		ABZR86_RS16420	0.81	-0.8
3,709,097	-		ABZR86_RS16420	0.81	-0.6
3,709,097	-		ABZR86_RS16420	0.81	+0.4
3,709,097	-		ABZR86_RS16420	0.81	+0.4
3,709,104	+		ABZR86_RS16420	0.83	-0.8
3,709,105	-		ABZR86_RS16420	0.84	+0.4
3,709,116	+		ABZR86_RS16420	0.87	+0.2
3,709,116	+		ABZR86_RS16420	0.87	+0.2
3,709,116	+		ABZR86_RS16420	0.87	+0.3
3,709,116	+		ABZR86_RS16420	0.87	+0.0
3,709,116	+		ABZR86_RS16420	0.87	-0.1
3,709,116	+		ABZR86_RS16420	0.87	+0.3
3,709,116	+		ABZR86_RS16420	0.87	-0.5
3,709,116	+		ABZR86_RS16420	0.87	+1.2
3,709,117	-		ABZR86_RS16420	0.87	-0.5
3,709,117	-		ABZR86_RS16420	0.87	-0.1
3,709,117	-		ABZR86_RS16420	0.87	-0.2
3,709,117	-		ABZR86_RS16420	0.87	+0.6
3,709,117	-		ABZR86_RS16420	0.87	+0.8
3,709,152	+				+0.0
3,709,152	+				+1.0
3,709,152	+				-0.1
3,709,152	+				+0.8
3,709,153	-				+1.3
3,709,153	-				-0.9
3,709,172	+				-0.2
3,709,173	-				-0.5
3,709,235	+				+0.1
3,709,236	-				-1.2
3,709,239	-				+0.4
3,709,239	-				-0.3
3,709,239	-				-0.2
3,709,247	+				-0.5
3,709,247	+				+0.2
3,709,247	+				+0.1
3,709,248	-				+0.1
3,709,248	-				+0.2
3,709,248	-				+0.8
3,709,248	-				-0.1
3,709,248	-				-0.3
3,709,250	+				+0.4
3,709,250	+				-0.2
3,709,250	+				+0.8
3,709,250	+				-0.5
3,709,250	+				+0.3
3,709,250	+				+1.2
3,709,250	+				+0.4
3,709,250	+				-0.0
3,709,251	-				-0.2
3,709,251	-				-0.8
3,709,251	-				-0.6
3,709,430	+		ABZR86_RS16425	0.28	+0.8
3,709,430	+		ABZR86_RS16425	0.28	+0.4
3,709,430	+		ABZR86_RS16425	0.28	-0.1
3,709,430	+		ABZR86_RS16425	0.28	+0.3
3,709,430	+		ABZR86_RS16425	0.28	-0.3
3,709,430	+		ABZR86_RS16425	0.28	-0.3
3,709,430	+		ABZR86_RS16425	0.28	-0.4
3,709,430	+		ABZR86_RS16425	0.28	+0.1
3,709,431	-		ABZR86_RS16425	0.28	+0.6
3,709,431	-		ABZR86_RS16425	0.28	-0.1
3,709,431	-		ABZR86_RS16425	0.28	+0.7
3,709,431	-		ABZR86_RS16425	0.28	-0.0
3,709,431	-		ABZR86_RS16425	0.28	+0.6
3,709,552	-		ABZR86_RS16425	0.41	-0.8
3,709,552	-		ABZR86_RS16425	0.41	+0.3
3,709,552	-		ABZR86_RS16425	0.41	+0.5
3,709,571	+		ABZR86_RS16425	0.43	-0.6
3,709,572	-		ABZR86_RS16425	0.43	-0.9
3,709,617	+		ABZR86_RS16425	0.48	+0.1
3,709,617	+		ABZR86_RS16425	0.48	-0.3
3,709,617	+		ABZR86_RS16425	0.48	+0.3
3,709,618	-		ABZR86_RS16425	0.48	+0.0
3,709,618	-		ABZR86_RS16425	0.48	-0.6
3,709,635	-		ABZR86_RS16425	0.50	-0.0
3,709,643	+		ABZR86_RS16425	0.51	+0.2
3,709,643	+		ABZR86_RS16425	0.51	+0.5
3,709,730	+		ABZR86_RS16425	0.60	+0.4
3,709,731	-		ABZR86_RS16425	0.60	-0.1
3,709,731	-		ABZR86_RS16425	0.60	+0.0
3,709,772	+		ABZR86_RS16425	0.64	-0.8
3,709,772	+		ABZR86_RS16425	0.64	-0.3
3,709,772	+		ABZR86_RS16425	0.64	+0.5
3,709,773	-		ABZR86_RS16425	0.65	+0.2
3,709,773	-		ABZR86_RS16425	0.65	-0.1
3,709,773	-		ABZR86_RS16425	0.65	-0.2
3,709,773	-		ABZR86_RS16425	0.65	-0.7
3,709,782	+		ABZR86_RS16425	0.65	+0.0
3,710,029	-				-0.6