Experiment: A22 0.02 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10755 and ABZR86_RS10760 are separated by 289 nucleotides ABZR86_RS10760 and ABZR86_RS10765 are separated by 15 nucleotides ABZR86_RS10765 and ABZR86_RS10770 are separated by 244 nucleotides
ABZR86_RS10755: ABZR86_RS10755 - oligopeptide transporter, OPT family, at 2,391,569 to 2,393,554
_RS10755
ABZR86_RS10760: ABZR86_RS10760 - nuclear transport factor 2 family protein, at 2,393,844 to 2,394,305
_RS10760
ABZR86_RS10765: ABZR86_RS10765 - hypothetical protein, at 2,394,321 to 2,394,785
_RS10765
ABZR86_RS10770: ABZR86_RS10770 - transcriptional regulator, at 2,395,030 to 2,395,353
_RS10770
Position (kb)
2393
2394
2395 Strain fitness (log2 ratio)
-1
0
1 at 2392.968 kb on + strand, within ABZR86_RS10755 at 2392.968 kb on + strand, within ABZR86_RS10755 at 2392.968 kb on + strand, within ABZR86_RS10755 at 2393.193 kb on + strand, within ABZR86_RS10755 at 2393.193 kb on + strand, within ABZR86_RS10755 at 2393.193 kb on + strand, within ABZR86_RS10755 at 2393.193 kb on + strand, within ABZR86_RS10755 at 2393.193 kb on + strand, within ABZR86_RS10755 at 2393.194 kb on - strand, within ABZR86_RS10755 at 2393.194 kb on - strand, within ABZR86_RS10755 at 2393.504 kb on + strand at 2393.505 kb on - strand at 2393.505 kb on - strand at 2393.595 kb on + strand at 2393.595 kb on + strand at 2393.595 kb on + strand at 2393.659 kb on - strand at 2393.812 kb on + strand at 2393.813 kb on - strand at 2394.051 kb on + strand, within ABZR86_RS10760 at 2394.052 kb on - strand, within ABZR86_RS10760 at 2394.052 kb on - strand, within ABZR86_RS10760 at 2394.102 kb on + strand, within ABZR86_RS10760 at 2394.102 kb on + strand, within ABZR86_RS10760 at 2394.103 kb on - strand, within ABZR86_RS10760 at 2394.103 kb on - strand, within ABZR86_RS10760 at 2394.103 kb on - strand, within ABZR86_RS10760 at 2394.285 kb on + strand at 2394.285 kb on + strand at 2394.285 kb on + strand at 2394.286 kb on - strand at 2394.286 kb on - strand at 2394.406 kb on + strand, within ABZR86_RS10765 at 2394.406 kb on + strand, within ABZR86_RS10765 at 2394.406 kb on + strand, within ABZR86_RS10765 at 2394.406 kb on + strand, within ABZR86_RS10765 at 2394.406 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.656 kb on + strand, within ABZR86_RS10765 at 2394.657 kb on - strand, within ABZR86_RS10765 at 2394.657 kb on - strand, within ABZR86_RS10765 at 2394.657 kb on - strand, within ABZR86_RS10765 at 2394.703 kb on + strand, within ABZR86_RS10765 at 2394.703 kb on + strand, within ABZR86_RS10765 at 2394.704 kb on - strand, within ABZR86_RS10765 at 2394.925 kb on + strand at 2394.925 kb on + strand at 2394.925 kb on + strand at 2394.925 kb on + strand at 2394.926 kb on - strand at 2394.983 kb on + strand at 2394.984 kb on - strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.004 kb on + strand at 2395.005 kb on - strand at 2395.005 kb on - strand at 2395.241 kb on - strand, within ABZR86_RS10770 at 2395.271 kb on + strand, within ABZR86_RS10770
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.02 mg/ml remove 2,392,968 + ABZR86_RS10755 0.70 -1.1 2,392,968 + ABZR86_RS10755 0.70 -0.3 2,392,968 + ABZR86_RS10755 0.70 +0.4 2,393,193 + ABZR86_RS10755 0.82 -0.2 2,393,193 + ABZR86_RS10755 0.82 +0.1 2,393,193 + ABZR86_RS10755 0.82 -0.2 2,393,193 + ABZR86_RS10755 0.82 -0.2 2,393,193 + ABZR86_RS10755 0.82 +0.9 2,393,194 - ABZR86_RS10755 0.82 +0.1 2,393,194 - ABZR86_RS10755 0.82 -0.2 2,393,504 + +0.5 2,393,505 - -0.7 2,393,505 - -0.3 2,393,595 + +0.4 2,393,595 + -0.2 2,393,595 + +0.4 2,393,659 - +0.4 2,393,812 + +0.4 2,393,813 - +0.1 2,394,051 + ABZR86_RS10760 0.45 +0.1 2,394,052 - ABZR86_RS10760 0.45 -0.3 2,394,052 - ABZR86_RS10760 0.45 -1.0 2,394,102 + ABZR86_RS10760 0.56 +0.1 2,394,102 + ABZR86_RS10760 0.56 -0.6 2,394,103 - ABZR86_RS10760 0.56 -0.3 2,394,103 - ABZR86_RS10760 0.56 -0.2 2,394,103 - ABZR86_RS10760 0.56 +0.1 2,394,285 + +1.6 2,394,285 + +0.3 2,394,285 + -0.6 2,394,286 - -0.2 2,394,286 - -0.6 2,394,406 + ABZR86_RS10765 0.18 +0.2 2,394,406 + ABZR86_RS10765 0.18 -0.3 2,394,406 + ABZR86_RS10765 0.18 -0.6 2,394,406 + ABZR86_RS10765 0.18 -0.2 2,394,406 + ABZR86_RS10765 0.18 +0.7 2,394,656 + ABZR86_RS10765 0.72 -0.3 2,394,656 + ABZR86_RS10765 0.72 -0.2 2,394,656 + ABZR86_RS10765 0.72 -0.2 2,394,656 + ABZR86_RS10765 0.72 -0.9 2,394,656 + ABZR86_RS10765 0.72 +1.0 2,394,656 + ABZR86_RS10765 0.72 +0.3 2,394,656 + ABZR86_RS10765 0.72 -0.0 2,394,657 - ABZR86_RS10765 0.72 -0.2 2,394,657 - ABZR86_RS10765 0.72 +0.1 2,394,657 - ABZR86_RS10765 0.72 +0.1 2,394,703 + ABZR86_RS10765 0.82 +0.4 2,394,703 + ABZR86_RS10765 0.82 -0.7 2,394,704 - ABZR86_RS10765 0.82 +0.3 2,394,925 + +0.0 2,394,925 + -0.4 2,394,925 + +0.1 2,394,925 + +0.5 2,394,926 - -0.0 2,394,983 + -0.1 2,394,984 - -0.3 2,395,004 + -0.3 2,395,004 + -0.4 2,395,004 + +1.0 2,395,004 + -1.6 2,395,004 + -1.7 2,395,004 + +1.3 2,395,004 + -0.2 2,395,005 - -0.4 2,395,005 - +0.2 2,395,241 - ABZR86_RS10770 0.65 -0.2 2,395,271 + ABZR86_RS10770 0.74 -0.2
Or see this region's nucleotide sequence