Experiment: MoYLS4 with Vancomycin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2266 and DvMF_2267 overlap by 1 nucleotides DvMF_2267 and DvMF_2268 are separated by 743 nucleotides
DvMF_2266: DvMF_2266 - putative lipoprotein (RefSeq), at 2,846,772 to 2,848,310
_2266
DvMF_2267: DvMF_2267 - peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin (RefSeq), at 2,848,310 to 2,849,344
_2267
DvMF_2268: DvMF_2268 - branched-chain amino acid aminotransferase (RefSeq), at 2,850,088 to 2,851,011
_2268
Position (kb)
2848
2849
2850 Strain fitness (log2 ratio)
-1
0
1 at 2847.601 kb on + strand, within DvMF_2266 at 2847.609 kb on - strand, within DvMF_2266 at 2847.688 kb on - strand, within DvMF_2266 at 2847.777 kb on + strand, within DvMF_2266 at 2847.839 kb on + strand, within DvMF_2266 at 2847.839 kb on + strand, within DvMF_2266 at 2847.850 kb on + strand, within DvMF_2266 at 2847.850 kb on + strand, within DvMF_2266 at 2847.858 kb on - strand, within DvMF_2266 at 2848.164 kb on - strand at 2848.243 kb on + strand at 2848.277 kb on + strand at 2848.297 kb on + strand at 2848.381 kb on + strand at 2848.471 kb on - strand, within DvMF_2267 at 2848.603 kb on + strand, within DvMF_2267 at 2848.675 kb on + strand, within DvMF_2267 at 2848.683 kb on - strand, within DvMF_2267 at 2848.694 kb on + strand, within DvMF_2267 at 2848.711 kb on - strand, within DvMF_2267 at 2848.711 kb on - strand, within DvMF_2267 at 2848.785 kb on + strand, within DvMF_2267 at 2848.785 kb on + strand, within DvMF_2267 at 2849.223 kb on - strand, within DvMF_2267 at 2849.345 kb on - strand at 2849.496 kb on + strand at 2849.499 kb on - strand at 2849.504 kb on - strand at 2849.537 kb on - strand at 2849.544 kb on - strand at 2849.736 kb on + strand at 2849.895 kb on + strand at 2850.071 kb on + strand at 2850.151 kb on - strand at 2850.170 kb on - strand at 2850.174 kb on + strand at 2850.182 kb on - strand, within DvMF_2268
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Vancomycin 0.25 mg/ml remove 2,847,601 + DvMF_2266 0.54 -0.2 2,847,609 - DvMF_2266 0.54 +0.0 2,847,688 - DvMF_2266 0.60 -0.4 2,847,777 + DvMF_2266 0.65 +0.0 2,847,839 + DvMF_2266 0.69 +0.2 2,847,839 + DvMF_2266 0.69 -0.2 2,847,850 + DvMF_2266 0.70 +0.4 2,847,850 + DvMF_2266 0.70 -0.2 2,847,858 - DvMF_2266 0.71 +0.1 2,848,164 - -0.0 2,848,243 + -0.2 2,848,277 + -0.2 2,848,297 + +0.0 2,848,381 + -0.4 2,848,471 - DvMF_2267 0.16 -0.2 2,848,603 + DvMF_2267 0.28 -0.1 2,848,675 + DvMF_2267 0.35 +0.8 2,848,683 - DvMF_2267 0.36 -0.3 2,848,694 + DvMF_2267 0.37 +0.0 2,848,711 - DvMF_2267 0.39 -0.4 2,848,711 - DvMF_2267 0.39 -0.5 2,848,785 + DvMF_2267 0.46 -0.4 2,848,785 + DvMF_2267 0.46 +0.4 2,849,223 - DvMF_2267 0.88 -0.3 2,849,345 - -0.5 2,849,496 + -0.6 2,849,499 - -0.8 2,849,504 - -0.2 2,849,537 - -0.6 2,849,544 - -0.9 2,849,736 + -0.6 2,849,895 + +0.2 2,850,071 + -0.7 2,850,151 - -0.6 2,850,170 - -0.5 2,850,174 + -0.5 2,850,182 - DvMF_2268 0.10 -0.2
Or see this region's nucleotide sequence