Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4091
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,915,281 | + | Shewana3_4092 | 0.49 | +0.3 | |
4,915,281 | + | Shewana3_4092 | 0.49 | +0.2 | |
4,915,281 | + | Shewana3_4092 | 0.49 | -0.4 | |
4,915,281 | + | Shewana3_4092 | 0.49 | -0.2 | |
4,915,281 | + | Shewana3_4092 | 0.49 | +0.6 | |
4,915,289 | - | Shewana3_4092 | 0.52 | -0.1 | |
4,915,289 | - | Shewana3_4092 | 0.52 | +1.0 | |
4,915,289 | - | Shewana3_4092 | 0.52 | +0.6 | |
4,915,289 | - | Shewana3_4092 | 0.52 | -0.1 | |
4,915,487 | - | -2.7 | |||
4,915,528 | + | -2.7 | |||
4,915,612 | + | Shewana3_4093 | 0.18 | -0.7 | |
4,915,620 | - | Shewana3_4093 | 0.18 | -1.6 | |
4,915,886 | + | Shewana3_4093 | 0.43 | -0.5 | |
4,915,894 | - | Shewana3_4093 | 0.44 | -3.1 | |
4,915,937 | - | Shewana3_4093 | 0.48 | -2.5 | |
4,915,939 | - | Shewana3_4093 | 0.48 | -1.8 | |
4,915,969 | - | Shewana3_4093 | 0.51 | -2.5 | |
4,916,000 | + | Shewana3_4093 | 0.54 | -2.4 | |
4,916,068 | + | Shewana3_4093 | 0.60 | -1.0 | |
4,916,076 | - | Shewana3_4093 | 0.61 | -2.2 | |
4,916,083 | + | Shewana3_4093 | 0.62 | -1.5 |
Or see this region's nucleotide sequence