Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3872

Experiment: Fusidic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.5 mg/ml
4,648,231	+		Shewana3_3871	0.58	-1.5
4,648,244	+		Shewana3_3871	0.58	-1.4
4,648,261	-		Shewana3_3871	0.59	-0.3
4,648,280	-		Shewana3_3871	0.60	+1.3
4,648,349	+		Shewana3_3871	0.63	-1.0
4,648,386	-		Shewana3_3871	0.65	-0.3
4,648,420	+		Shewana3_3871	0.66	+0.8
4,648,428	-		Shewana3_3871	0.67	-2.0
4,648,428	-		Shewana3_3871	0.67	-0.7
4,648,429	-		Shewana3_3871	0.67	+0.0
4,648,448	-		Shewana3_3871	0.68	-0.3
4,648,448	-		Shewana3_3871	0.68	+0.1
4,648,457	+		Shewana3_3871	0.68	-0.7
4,648,466	-		Shewana3_3871	0.69	-0.5
4,648,478	-		Shewana3_3871	0.69	+0.1
4,648,483	-		Shewana3_3871	0.69	-0.5
4,648,520	+		Shewana3_3871	0.71	-1.1
4,648,536	+		Shewana3_3871	0.72	-2.5
4,648,542	-		Shewana3_3871	0.72	-1.5
4,648,580	+		Shewana3_3871	0.74	+0.7
4,648,635	+		Shewana3_3871	0.76	-1.0
4,648,635	+		Shewana3_3871	0.76	+0.2
4,648,643	-		Shewana3_3871	0.77	+0.0
4,648,643	-		Shewana3_3871	0.77	-0.9
4,648,704	+		Shewana3_3871	0.80	-0.9
4,648,709	+		Shewana3_3871	0.80	-1.8
4,648,709	+		Shewana3_3871	0.80	-0.5
4,648,723	-		Shewana3_3871	0.80	-1.2
4,648,724	-		Shewana3_3871	0.81	+0.5
4,648,726	-		Shewana3_3871	0.81	-1.0
4,648,745	+		Shewana3_3871	0.82	-0.8
4,648,745	+		Shewana3_3871	0.82	-1.2
4,648,745	+		Shewana3_3871	0.82	-1.7
4,648,753	-		Shewana3_3871	0.82	-0.6
4,648,754	-		Shewana3_3871	0.82	-1.3
4,648,783	+		Shewana3_3871	0.83	-2.8
4,648,783	+		Shewana3_3871	0.83	+1.3
4,648,783	+		Shewana3_3871	0.83	-1.3
4,648,783	+		Shewana3_3871	0.83	-0.8
4,648,783	+		Shewana3_3871	0.83	-0.3
4,648,783	+		Shewana3_3871	0.83	-0.2
4,648,784	+		Shewana3_3871	0.83	-0.2
4,648,784	+		Shewana3_3871	0.83	-0.3
4,648,784	-		Shewana3_3871	0.83	-0.0
4,648,791	-		Shewana3_3871	0.84	-1.3
4,648,791	-		Shewana3_3871	0.84	-0.6
4,648,791	-		Shewana3_3871	0.84	-0.7
4,648,791	-		Shewana3_3871	0.84	+1.2
4,648,791	-		Shewana3_3871	0.84	-2.0
4,648,791	-		Shewana3_3871	0.84	+1.0
4,648,791	-		Shewana3_3871	0.84	-0.6
4,648,792	-		Shewana3_3871	0.84	+0.8
4,648,792	-		Shewana3_3871	0.84	-1.8
4,648,792	-		Shewana3_3871	0.84	-0.5
4,648,803	-		Shewana3_3871	0.84	-0.6
4,648,809	-		Shewana3_3871	0.84	-0.1
4,648,861	+		Shewana3_3871	0.87	-0.6
4,648,877	+		Shewana3_3871	0.88	-1.5
4,648,882	+		Shewana3_3871	0.88	-1.0
4,648,882	+		Shewana3_3871	0.88	-0.9
4,648,890	-		Shewana3_3871	0.88	-1.2
4,648,896	+		Shewana3_3871	0.88	+0.3
4,648,941	+				-0.4
4,648,941	+				+0.0
4,648,955	+				+1.2
4,648,955	+				-0.4
4,648,956	-				+0.2
4,648,958	-				+1.1
4,648,958	-				-1.3
4,648,958	-				-2.7
4,648,963	+				-1.0
4,648,963	-				-1.6
4,648,964	+				+0.6
4,648,973	+				-0.1
4,648,973	+				+0.1
4,648,973	+				-0.5
4,648,973	+				-1.1
4,648,980	-				-1.9
4,648,981	-				-1.0
4,648,981	-				-0.0
4,648,981	-				-1.1
4,649,003	-				-0.6
4,649,005	+				-0.7
4,649,010	+				-0.5
4,649,018	-				+0.2
4,649,018	-				-1.0
4,649,040	+				-0.1
4,649,065	+				-0.7
4,649,080	+				-0.6
4,649,088	-				-1.1
4,649,088	-				-0.7
4,649,179	-				-0.3
4,649,297	+				-0.0
4,649,305	+				+1.1
4,649,305	-				-0.8
4,649,305	-				-1.6
4,649,313	-				-0.7
4,649,329	+				-0.2
4,649,376	+	potE	Shewana3_3872	0.11	-0.7
4,649,378	+	potE	Shewana3_3872	0.11	-0.2
4,649,378	+	potE	Shewana3_3872	0.11	-1.5
4,649,386	-	potE	Shewana3_3872	0.12	-0.5
4,649,392	+	potE	Shewana3_3872	0.12	+0.3
4,649,394	-	potE	Shewana3_3872	0.12	+0.4
4,649,394	-	potE	Shewana3_3872	0.12	-0.6
4,649,399	-	potE	Shewana3_3872	0.13	-0.7
4,649,400	-	potE	Shewana3_3872	0.13	-0.6
4,649,400	-	potE	Shewana3_3872	0.13	+0.1
4,649,491	+	potE	Shewana3_3872	0.20	+2.8
4,649,545	+	potE	Shewana3_3872	0.24	+0.5
4,649,558	-	potE	Shewana3_3872	0.25	-0.6
4,649,563	+	potE	Shewana3_3872	0.25	+0.4
4,649,645	-	potE	Shewana3_3872	0.31	+1.8
4,649,754	+	potE	Shewana3_3872	0.40	-0.5
4,649,762	-	potE	Shewana3_3872	0.40	-0.1
4,649,797	+	potE	Shewana3_3872	0.43	-1.0
4,649,874	+	potE	Shewana3_3872	0.49	-0.9
4,649,937	-	potE	Shewana3_3872	0.54	-3.4
4,650,018	-	potE	Shewana3_3872	0.60	-0.8
4,650,075	+	potE	Shewana3_3872	0.64	-0.6
4,650,077	+	potE	Shewana3_3872	0.64	+0.0
4,650,083	-	potE	Shewana3_3872	0.65	-0.1
4,650,130	+	potE	Shewana3_3872	0.68	-1.2
4,650,131	-	potE	Shewana3_3872	0.68	-1.9
4,650,153	-	potE	Shewana3_3872	0.70	+0.1
4,650,160	+	potE	Shewana3_3872	0.70	-1.3
4,650,171	+	potE	Shewana3_3872	0.71	-0.6
4,650,278	-	potE	Shewana3_3872	0.79	-0.9
4,650,321	-	potE	Shewana3_3872	0.83	-1.7
4,650,385	-	potE	Shewana3_3872	0.88	-1.7
4,650,415	+	potE	Shewana3_3872	0.90	-0.2
4,650,417	+	potE	Shewana3_3872	0.90	+0.7
4,650,433	+				+2.6
4,650,441	-				+0.2
4,650,441	-				-1.8
4,650,443	-				-0.0
4,650,534	+				-0.5
4,650,534	+				-0.0
4,650,561	-				-0.9
4,650,617	+				+0.0
4,650,625	-				+0.0
4,650,625	-				-0.7
4,650,625	-				-0.3
4,650,835	+		Shewana3_3873	0.14	+0.7
4,650,855	+		Shewana3_3873	0.16	+1.3
4,650,994	+		Shewana3_3873	0.28	+0.2
4,651,163	-		Shewana3_3873	0.42	+1.9
4,651,205	+		Shewana3_3873	0.46	-0.5
4,651,319	+		Shewana3_3873	0.56	+0.1
4,651,319	+		Shewana3_3873	0.56	+0.7
4,651,444	+		Shewana3_3873	0.67	-1.2