Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3672
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,409,061 | + | Shewana3_3671 | 0.27 | -0.1 | |
4,409,088 | + | Shewana3_3671 | 0.29 | -0.4 | |
4,409,088 | + | Shewana3_3671 | 0.29 | -0.0 | |
4,409,157 | + | Shewana3_3671 | 0.35 | +0.4 | |
4,409,172 | + | Shewana3_3671 | 0.37 | -4.7 | |
4,409,172 | + | Shewana3_3671 | 0.37 | -1.0 | |
4,409,180 | - | Shewana3_3671 | 0.37 | +2.4 | |
4,409,180 | - | Shewana3_3671 | 0.37 | +1.3 | |
4,409,202 | + | Shewana3_3671 | 0.39 | -0.3 | |
4,409,210 | - | Shewana3_3671 | 0.40 | +0.6 | |
4,409,230 | - | Shewana3_3671 | 0.41 | -0.4 | |
4,409,230 | - | Shewana3_3671 | 0.41 | -0.3 | |
4,409,307 | + | Shewana3_3671 | 0.48 | -0.2 | |
4,409,307 | + | Shewana3_3671 | 0.48 | +1.3 | |
4,409,549 | + | Shewana3_3671 | 0.69 | +0.7 | |
4,409,653 | + | Shewana3_3671 | 0.77 | -0.1 | |
4,409,654 | - | Shewana3_3671 | 0.78 | +1.4 | |
4,409,666 | + | Shewana3_3671 | 0.79 | -0.2 | |
4,409,666 | + | Shewana3_3671 | 0.79 | -0.9 | |
4,409,674 | - | Shewana3_3671 | 0.79 | +0.4 | |
4,409,674 | - | Shewana3_3671 | 0.79 | +0.1 | |
4,409,694 | + | Shewana3_3671 | 0.81 | -0.2 | |
4,409,860 | + | -2.2 | |||
4,409,932 | - | +1.3 |
Or see this region's nucleotide sequence