Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3077
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,690,426 | + | Shewana3_3076 | 0.63 | -0.1 | |
3,691,169 | + | Shewana3_3077 | 0.16 | -3.8 | |
3,691,185 | + | Shewana3_3077 | 0.22 | -2.1 | |
3,691,192 | + | Shewana3_3077 | 0.24 | -2.1 | |
3,691,215 | + | Shewana3_3077 | 0.33 | -1.5 | |
3,691,215 | + | Shewana3_3077 | 0.33 | -1.6 | |
3,691,274 | + | Shewana3_3077 | 0.55 | -3.2 | |
3,691,288 | + | Shewana3_3077 | 0.60 | -0.3 | |
3,691,297 | + | Shewana3_3077 | 0.64 | -1.3 | |
3,691,547 | - | -2.1 | |||
3,691,565 | + | +1.1 | |||
3,691,573 | - | -0.5 | |||
3,691,573 | - | -1.2 | |||
3,691,573 | - | +1.3 | |||
3,691,573 | - | -1.5 | |||
3,691,583 | + | -0.3 | |||
3,691,616 | + | +0.1 | |||
3,691,616 | + | +1.3 | |||
3,691,624 | - | -1.4 | |||
3,691,647 | - | -1.9 | |||
3,691,744 | + | -1.1 | |||
3,692,016 | + | -0.9 | |||
3,692,024 | - | -1.4 | |||
3,692,081 | + | +0.9 | |||
3,692,117 | - | Shewana3_3078 | 0.12 | +0.1 | |
3,692,253 | + | Shewana3_3078 | 0.28 | +0.9 | |
3,692,378 | + | Shewana3_3078 | 0.43 | +0.1 |
Or see this region's nucleotide sequence