Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3024
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,628,778 | - | acpS | Shewana3_3022 | 0.85 | -1.3 |
3,629,629 | - | +0.8 | |||
3,629,629 | - | -1.3 | |||
3,629,840 | + | Shewana3_3024 | 0.25 | +0.1 | |
3,629,975 | + | Shewana3_3024 | 0.45 | -2.2 | |
3,629,983 | - | Shewana3_3024 | 0.46 | -1.8 | |
3,629,983 | - | Shewana3_3024 | 0.46 | -1.8 | |
3,629,990 | + | Shewana3_3024 | 0.47 | -0.2 | |
3,630,066 | - | Shewana3_3024 | 0.58 | -2.2 | |
3,630,187 | - | Shewana3_3024 | 0.75 | -2.4 | |
3,630,328 | - | -0.2 | |||
3,630,409 | + | -1.6 |
Or see this region's nucleotide sequence