Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2887
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,454,022 | + | -0.7 | |||
3,454,147 | - | -0.6 | |||
3,454,173 | + | -0.3 | |||
3,454,205 | - | xni | Shewana3_2886 | 0.11 | +2.2 |
3,454,335 | - | xni | Shewana3_2886 | 0.28 | -3.6 |
3,454,362 | + | xni | Shewana3_2886 | 0.32 | -0.4 |
3,454,381 | + | xni | Shewana3_2886 | 0.34 | -0.6 |
3,454,502 | + | xni | Shewana3_2886 | 0.49 | +1.2 |
3,454,510 | - | xni | Shewana3_2886 | 0.50 | +0.0 |
3,454,726 | + | xni | Shewana3_2886 | 0.78 | +1.3 |
3,454,883 | - | -1.3 | |||
3,455,090 | - | +2.2 | |||
3,455,128 | + | Shewana3_2887 | 0.28 | -1.1 | |
3,455,172 | - | Shewana3_2887 | 0.38 | -2.5 | |
3,455,225 | + | Shewana3_2887 | 0.51 | -1.5 | |
3,455,640 | - | -0.2 | |||
3,455,640 | - | -0.3 | |||
3,455,640 | - | -1.2 | |||
3,455,966 | - | -1.9 | |||
3,456,068 | + | -0.1 | |||
3,456,127 | - | -0.6 |
Or see this region's nucleotide sequence