Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2736

Experiment: Fusidic 0.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_2734 and Shewana3_2735 are separated by 199 nucleotidesShewana3_2735 and Shewana3_2736 are separated by 60 nucleotidesShewana3_2736 and Shewana3_2737 are separated by 95 nucleotides Shewana3_2734: Shewana3_2734 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 3,264,559 to 3,266,817 _2734 Shewana3_2735: Shewana3_2735 - ACT domain-containing protein (RefSeq), at 3,267,017 to 3,267,517 _2735 Shewana3_2736: Shewana3_2736 - hypothetical protein (RefSeq), at 3,267,578 to 3,268,465 _2736 Shewana3_2737: Shewana3_2737 - putative esterase (RefSeq), at 3,268,561 to 3,269,721 _2737 Position (kb) 3267 3268 3269Strain fitness (log2 ratio) -2 -1 0 1 2at 3266.797 kb on - strandat 3267.114 kb on + strand, within Shewana3_2735at 3267.114 kb on + strand, within Shewana3_2735at 3267.122 kb on - strand, within Shewana3_2735at 3267.122 kb on - strand, within Shewana3_2735at 3267.122 kb on - strand, within Shewana3_2735at 3267.219 kb on + strand, within Shewana3_2735at 3267.290 kb on - strand, within Shewana3_2735at 3267.381 kb on - strand, within Shewana3_2735at 3267.389 kb on - strand, within Shewana3_2735at 3267.416 kb on + strand, within Shewana3_2735at 3267.446 kb on - strand, within Shewana3_2735at 3267.461 kb on + strand, within Shewana3_2735at 3267.679 kb on + strand, within Shewana3_2736at 3267.679 kb on + strand, within Shewana3_2736at 3267.679 kb on + strand, within Shewana3_2736at 3267.687 kb on - strand, within Shewana3_2736at 3267.687 kb on - strand, within Shewana3_2736at 3267.795 kb on + strand, within Shewana3_2736at 3267.803 kb on - strand, within Shewana3_2736at 3267.828 kb on - strand, within Shewana3_2736at 3268.048 kb on + strand, within Shewana3_2736at 3268.163 kb on - strand, within Shewana3_2736at 3268.194 kb on + strand, within Shewana3_2736at 3268.194 kb on + strand, within Shewana3_2736at 3268.271 kb on + strand, within Shewana3_2736at 3268.279 kb on - strand, within Shewana3_2736at 3268.561 kb on + strandat 3268.814 kb on + strand, within Shewana3_2737at 3268.889 kb on - strand, within Shewana3_2737at 3269.291 kb on + strand, within Shewana3_2737at 3269.291 kb on + strand, within Shewana3_2737at 3269.398 kb on + strand, within Shewana3_2737at 3269.415 kb on + strand, within Shewana3_2737at 3269.423 kb on - strand, within Shewana3_2737at 3269.423 kb on - strand, within Shewana3_2737at 3269.430 kb on + strand, within Shewana3_2737

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Per-strain Table

Position Strand Gene LocusTag Fraction Fusidic 0.5 mg/ml
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3,266,797 - +0.4
3,267,114 + Shewana3_2735 0.19 +0.0
3,267,114 + Shewana3_2735 0.19 +0.6
3,267,122 - Shewana3_2735 0.21 -2.3
3,267,122 - Shewana3_2735 0.21 +1.2
3,267,122 - Shewana3_2735 0.21 -1.1
3,267,219 + Shewana3_2735 0.40 +0.9
3,267,290 - Shewana3_2735 0.54 -0.4
3,267,381 - Shewana3_2735 0.73 -0.1
3,267,389 - Shewana3_2735 0.74 -0.4
3,267,416 + Shewana3_2735 0.80 +1.2
3,267,446 - Shewana3_2735 0.86 -0.9
3,267,461 + Shewana3_2735 0.89 +1.0
3,267,679 + Shewana3_2736 0.11 -0.4
3,267,679 + Shewana3_2736 0.11 +0.6
3,267,679 + Shewana3_2736 0.11 -0.6
3,267,687 - Shewana3_2736 0.12 -0.3
3,267,687 - Shewana3_2736 0.12 -1.0
3,267,795 + Shewana3_2736 0.24 -0.1
3,267,803 - Shewana3_2736 0.25 -0.1
3,267,828 - Shewana3_2736 0.28 +0.6
3,268,048 + Shewana3_2736 0.53 -1.1
3,268,163 - Shewana3_2736 0.66 -1.1
3,268,194 + Shewana3_2736 0.69 -0.2
3,268,194 + Shewana3_2736 0.69 +0.0
3,268,271 + Shewana3_2736 0.78 -0.3
3,268,279 - Shewana3_2736 0.79 -1.3
3,268,561 + -1.2
3,268,814 + Shewana3_2737 0.22 +0.5
3,268,889 - Shewana3_2737 0.28 +0.6
3,269,291 + Shewana3_2737 0.63 -1.5
3,269,291 + Shewana3_2737 0.63 -0.8
3,269,398 + Shewana3_2737 0.72 +2.2
3,269,415 + Shewana3_2737 0.74 -0.4
3,269,423 - Shewana3_2737 0.74 +1.3
3,269,423 - Shewana3_2737 0.74 +2.2
3,269,430 + Shewana3_2737 0.75 +0.8

Or see this region's nucleotide sequence