Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2481
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,966,017 | - | Shewana3_2480 | 0.24 | -0.3 | |
2,966,282 | - | Shewana3_2480 | 0.53 | +1.7 | |
2,966,289 | - | Shewana3_2480 | 0.54 | +0.3 | |
2,966,575 | + | Shewana3_2480 | 0.85 | -1.0 | |
2,967,123 | - | Shewana3_2481 | 0.17 | -1.8 | |
2,967,365 | + | Shewana3_2481 | 0.38 | -0.4 | |
2,967,391 | - | Shewana3_2481 | 0.40 | +1.2 | |
2,967,614 | + | Shewana3_2481 | 0.59 | +2.0 | |
2,967,636 | - | Shewana3_2481 | 0.61 | -0.6 | |
2,967,658 | + | Shewana3_2481 | 0.63 | +0.7 | |
2,967,750 | + | Shewana3_2481 | 0.71 | +0.7 | |
2,967,752 | + | Shewana3_2481 | 0.71 | +0.2 | |
2,967,760 | - | Shewana3_2481 | 0.72 | -1.0 | |
2,967,852 | + | Shewana3_2481 | 0.80 | +0.3 | |
2,967,860 | - | Shewana3_2481 | 0.80 | +1.2 | |
2,968,154 | + | -0.8 | |||
2,968,482 | + | Shewana3_2482 | 0.27 | -0.8 | |
2,968,526 | + | Shewana3_2482 | 0.31 | -1.4 | |
2,968,534 | - | Shewana3_2482 | 0.32 | +0.1 | |
2,968,548 | + | Shewana3_2482 | 0.33 | +1.2 | |
2,968,800 | - | Shewana3_2482 | 0.58 | +1.4 | |
2,968,802 | + | Shewana3_2482 | 0.58 | -1.1 | |
2,968,842 | + | Shewana3_2482 | 0.62 | +0.4 | |
2,968,859 | + | Shewana3_2482 | 0.63 | +1.0 | |
2,969,055 | - | Shewana3_2482 | 0.82 | +1.0 |
Or see this region's nucleotide sequence