Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2319
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,791,429 | - | Shewana3_2318 | 0.39 | -1.5 | |
2,791,577 | + | Shewana3_2318 | 0.57 | -0.8 | |
2,791,814 | - | Shewana3_2318 | 0.85 | -0.5 | |
2,792,300 | - | def | Shewana3_2319 | 0.30 | +1.3 |
2,792,306 | + | def | Shewana3_2319 | 0.31 | +1.4 |
2,792,903 | - | Shewana3_2320 | 0.14 | -1.4 | |
2,792,913 | - | Shewana3_2320 | 0.17 | -1.2 | |
2,793,055 | - | Shewana3_2320 | 0.47 | -0.0 | |
2,793,072 | + | Shewana3_2320 | 0.51 | +1.4 | |
2,793,215 | - | Shewana3_2320 | 0.82 | -0.2 | |
2,793,327 | - | -0.6 | |||
2,793,349 | - | -0.4 | |||
2,793,473 | - | +1.4 |
Or see this region's nucleotide sequence