Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2015

Experiment: Fusidic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.5 mg/ml
2,401,176	+				+0.4
2,401,613	+		Shewana3_2014	0.39	+0.1
2,401,767	-		Shewana3_2014	0.56	-0.6
2,401,798	-		Shewana3_2014	0.59	-0.6
2,402,199	+				-0.8
2,402,308	+				-0.4
2,402,412	+				+0.3
2,402,425	-				+0.1
2,402,623	-		Shewana3_2015	0.14	-0.6
2,402,697	+		Shewana3_2015	0.16	+0.6
2,403,266	-		Shewana3_2015	0.33	-1.5
2,403,501	-		Shewana3_2015	0.40	+0.8
2,403,646	-		Shewana3_2015	0.44	+1.4
2,403,746	-		Shewana3_2015	0.47	-0.4
2,403,838	+		Shewana3_2015	0.50	+2.0
2,403,874	+		Shewana3_2015	0.51	+2.6
2,403,947	-		Shewana3_2015	0.53	+1.4
2,404,114	+		Shewana3_2015	0.58	-0.8
2,404,227	+		Shewana3_2015	0.61	+0.4
2,404,341	-		Shewana3_2015	0.65	+0.8
2,404,410	-		Shewana3_2015	0.67	-0.6
2,404,452	+		Shewana3_2015	0.68	-0.8
2,404,452	+		Shewana3_2015	0.68	+0.4
2,404,460	-		Shewana3_2015	0.68	-0.9
2,404,608	+		Shewana3_2015	0.73	-1.6
2,404,676	+		Shewana3_2015	0.75	+0.3
2,404,694	+		Shewana3_2015	0.75	-0.0
2,404,718	+		Shewana3_2015	0.76	+1.5
2,404,810	-		Shewana3_2015	0.79	+0.2
2,404,810	-		Shewana3_2015	0.79	-1.0
2,404,810	-		Shewana3_2015	0.79	+0.9
2,404,884	+		Shewana3_2015	0.81	-0.4
2,405,008	-		Shewana3_2015	0.85	+2.4
2,405,381	-				-0.2
2,405,588	-				+2.8
2,405,609	+				+0.4
2,405,653	-				-0.2
2,405,813	+		Shewana3_2016	0.19	+2.4
2,405,821	-		Shewana3_2016	0.19	+2.4
2,406,184	-		Shewana3_2016	0.44	-1.4
2,406,241	+		Shewana3_2016	0.48	+0.4
2,406,475	-		Shewana3_2016	0.64	-1.2