Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1955
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,326,094 | - | +2.4 | |||
2,326,129 | + | +0.1 | |||
2,326,129 | + | +0.4 | |||
2,326,129 | + | +0.5 | |||
2,326,147 | - | +0.1 | |||
2,326,339 | - | Shewana3_1954 | 0.31 | +1.4 | |
2,326,369 | + | Shewana3_1954 | 0.35 | +0.9 | |
2,327,035 | + | -0.7 | |||
2,327,606 | + | +1.0 | |||
2,327,748 | + | ruvA | Shewana3_1956 | 0.22 | -2.4 |
2,327,758 | + | ruvA | Shewana3_1956 | 0.24 | +1.4 |
2,327,848 | - | ruvA | Shewana3_1956 | 0.39 | +2.4 |
2,327,865 | + | ruvA | Shewana3_1956 | 0.41 | +0.4 |
2,328,507 | + | ruvB | Shewana3_1957 | 0.16 | +0.9 |
Or see this region's nucleotide sequence