Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1887
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,233,771 | + | Shewana3_1886 | 0.61 | -0.1 | |
| 2,233,880 | - | Shewana3_1886 | 0.69 | -1.7 | |
| 2,234,101 | - | Shewana3_1886 | 0.85 | +1.9 | |
| 2,234,123 | + | Shewana3_1886 | 0.87 | +0.4 | |
| 2,234,254 | + | -1.8 | |||
| 2,234,285 | - | +0.1 | |||
| 2,234,298 | - | -0.6 | |||
| 2,234,892 | + | +1.7 | |||
| 2,234,913 | - | +0.7 | |||
| 2,235,075 | - | mdoG | Shewana3_1887 | 0.20 | +0.1 |
| 2,235,233 | + | mdoG | Shewana3_1887 | 0.29 | -2.4 |
| 2,235,322 | - | mdoG | Shewana3_1887 | 0.35 | +1.4 |
| 2,235,350 | + | mdoG | Shewana3_1887 | 0.36 | -0.4 |
| 2,236,013 | + | mdoG | Shewana3_1887 | 0.77 | +1.3 |
| 2,236,082 | + | mdoG | Shewana3_1887 | 0.81 | +0.7 |
| 2,236,211 | + | mdoG | Shewana3_1887 | 0.89 | +1.2 |
| 2,236,793 | - | Shewana3_1888 | 0.17 | +1.4 | |
| 2,236,875 | - | Shewana3_1888 | 0.21 | +2.4 |
Or see this region's nucleotide sequence