Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1614

Experiment: Fusidic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.5 mg/ml
1,898,438	+		Shewana3_1613	0.86	+0.0
1,898,446	-		Shewana3_1613	0.86	+0.6
1,898,455	+		Shewana3_1613	0.87	+2.2
1,898,537	+				-1.2
1,898,537	+				-2.7
1,898,574	+				-2.2
1,898,635	+				+1.9
1,898,635	+				+0.6
1,898,635	+				-1.8
1,898,635	+				+1.9
1,898,635	+				+1.8
1,898,643	-				+0.6
1,898,643	-				+0.6
1,898,643	-				+0.6
1,898,670	-				+1.2
1,898,798	+				+0.9
1,898,808	+				+0.7
1,898,832	+				-1.2
1,898,832	+				-0.6
1,898,850	-				+1.2
1,898,863	+				+1.7
1,898,875	+				-0.6
1,898,901	+				+2.2
1,898,943	+				+1.2
1,898,950	-				+0.6
1,898,951	-				+2.2
1,898,952	-				-0.4
1,898,988	-				-0.2
1,899,065	-				+0.6
1,899,149	-				+2.3
1,899,196	+				-0.2
1,899,204	-				-1.4
1,899,291	+		Shewana3_1614	0.11	+1.2
1,899,292	-		Shewana3_1614	0.11	+2.2
1,899,448	+		Shewana3_1614	0.53	-2.6
1,899,503	-		Shewana3_1614	0.67	+0.6
1,899,568	+		Shewana3_1614	0.85	-0.4
1,899,710	+				+0.0
1,899,710	+				-0.0
1,899,723	-				+1.3
1,899,815	+				+2.2
1,899,915	+		Shewana3_1615	0.13	+1.8
1,899,990	+		Shewana3_1615	0.40	+2.6
1,900,089	+		Shewana3_1615	0.76	+2.2
1,900,089	+		Shewana3_1615	0.76	-0.0
1,900,097	-		Shewana3_1615	0.79	-0.8
1,900,097	-		Shewana3_1615	0.79	-0.5
1,900,097	-		Shewana3_1615	0.79	-0.5
1,900,100	+		Shewana3_1615	0.80	+1.2
1,900,108	-		Shewana3_1615	0.83	-3.0
1,900,118	-		Shewana3_1615	0.86	+0.2
1,900,138	+				-0.2
1,900,169	-				-0.3
1,900,169	-				-0.2
1,900,312	-				+1.2
1,900,334	-				+0.2
1,900,351	+				+1.2
1,900,351	+				+0.6
1,900,351	+				+0.6
1,900,351	+				+2.2
1,900,351	+				-0.4
1,900,359	-				-0.8
1,900,359	-				+1.2
1,900,359	-				-0.4
1,900,359	-				+2.2
1,900,386	-				-1.2
1,900,400	+				+2.2
1,900,400	+				+1.2
1,900,408	-				+0.2
1,900,408	-				+2.2
1,900,449	-				+1.2
1,900,456	+				+2.2
1,900,464	-				+1.2
1,900,464	-				-0.2
1,900,464	-				-0.4
1,900,475	+				-0.8
1,900,483	-				-1.5
1,900,511	+				+2.2
1,900,511	+				+0.6
1,900,511	+				-2.3
1,900,511	+				-0.8
1,900,511	+				+1.1
1,900,511	+				-2.3
1,900,519	-				-0.4
1,900,519	-				-0.4
1,900,519	-				+0.6
1,900,519	-				+1.2
1,900,524	-				-0.8
1,900,543	+				+0.4
1,900,544	-				-0.8
1,900,553	+				+2.2
1,900,553	+				+0.6
1,900,553	+				+1.2
1,900,553	+				+1.2
1,900,553	+				+2.2
1,900,553	+				+2.6
1,900,553	+				-0.4
1,900,553	+				-0.9
1,900,553	+				-0.6
1,900,553	+				+0.6
1,900,553	+				-0.2
1,900,553	+				+2.0
1,900,553	+				-0.2
1,900,553	+				+0.2
1,900,553	+				+1.6
1,900,555	-				-0.2
1,900,561	-				-0.8
1,900,561	-				+2.2
1,900,561	-				+2.2
1,900,561	-				+1.2
1,900,561	-				+2.6
1,900,561	-				+0.6
1,900,561	-				-0.8
1,900,561	-				-0.4
1,900,561	-				-0.4
1,900,561	-				-0.7
1,900,561	-				+2.2
1,900,561	-				+0.2
1,900,561	-				-0.2
1,900,561	-				+0.4
1,900,561	-				-0.6
1,900,561	-				-1.5
1,900,561	-				-0.4
1,900,561	-				+0.6
1,900,561	-				+1.2
1,900,561	-				+1.2
1,900,561	-				-0.5
1,900,625	+				-1.0