Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1396
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,610,824 | + | +1.0 | |||
1,611,335 | + | Shewana3_1395 | 0.71 | +1.0 | |
1,611,402 | - | Shewana3_1395 | 0.80 | +1.0 | |
1,611,414 | - | Shewana3_1395 | 0.82 | +2.0 | |
1,611,456 | + | +2.0 | |||
1,611,484 | + | -0.6 | |||
1,611,717 | - | -0.8 | |||
1,611,873 | - | Shewana3_1396 | 0.72 | -2.1 | |
1,612,133 | - | +0.2 | |||
1,612,133 | - | -1.0 | |||
1,612,133 | - | +0.2 | |||
1,612,141 | + | +1.0 | |||
1,612,292 | + | -0.6 | |||
1,612,387 | - | Shewana3_1397 | 0.15 | -0.6 | |
1,612,422 | + | Shewana3_1397 | 0.19 | -1.6 | |
1,612,460 | - | Shewana3_1397 | 0.22 | -2.2 |
Or see this region's nucleotide sequence