Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1149
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,354,972 | + | Shewana3_1148 | 0.45 | -0.5 | |
1,355,336 | + | Shewana3_1148 | 0.67 | +1.1 | |
1,355,339 | - | Shewana3_1148 | 0.67 | -0.7 | |
1,355,339 | - | Shewana3_1148 | 0.67 | -0.2 | |
1,355,675 | - | Shewana3_1148 | 0.87 | +0.9 | |
1,355,687 | + | Shewana3_1148 | 0.88 | +0.5 | |
1,355,695 | - | Shewana3_1148 | 0.88 | +1.6 | |
1,355,774 | - | +2.7 | |||
1,355,911 | + | -0.5 | |||
1,355,911 | + | -1.1 | |||
1,355,912 | + | -0.3 | |||
1,355,919 | - | +0.7 | |||
1,355,919 | - | +1.0 | |||
1,355,919 | - | -0.7 | |||
1,355,929 | - | +0.1 | |||
1,355,953 | - | Shewana3_1149 | 0.15 | +1.6 | |
1,356,165 | - | Shewana3_1149 | 0.72 | +0.3 | |
1,356,345 | - | -2.1 | |||
1,356,791 | - | +0.4 | |||
1,356,962 | - | Shewana3_1150 | 0.17 | -2.1 | |
1,356,962 | - | Shewana3_1150 | 0.17 | -0.3 | |
1,357,105 | - | Shewana3_1150 | 0.26 | -0.0 | |
1,357,154 | + | Shewana3_1150 | 0.30 | -0.4 |
Or see this region's nucleotide sequence