Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1124
Experiment: Fusidic 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,321,345 | - | -2.8 | |||
1,321,439 | - | +1.4 | |||
1,321,544 | - | Shewana3_1123 | 0.21 | +2.0 | |
1,321,878 | - | Shewana3_1123 | 0.58 | -1.0 | |
1,321,922 | + | Shewana3_1123 | 0.63 | +0.4 | |
1,322,101 | + | Shewana3_1123 | 0.83 | -1.9 | |
1,322,243 | - | +2.0 | |||
1,322,568 | + | Shewana3_1124 | 0.24 | -1.0 | |
1,322,958 | - | Shewana3_1124 | 0.64 | -0.6 | |
1,323,025 | - | Shewana3_1124 | 0.70 | +0.2 | |
1,323,151 | + | Shewana3_1124 | 0.83 | +3.7 | |
1,323,255 | - | +2.0 | |||
1,323,581 | + | -0.8 | |||
1,323,581 | + | +0.9 | |||
1,323,688 | + | Shewana3_1125 | 0.10 | +0.7 | |
1,323,688 | + | Shewana3_1125 | 0.10 | -1.1 | |
1,323,696 | - | Shewana3_1125 | 0.10 | +0.0 | |
1,323,711 | + | Shewana3_1125 | 0.11 | -0.4 | |
1,323,831 | - | Shewana3_1125 | 0.16 | -0.7 | |
1,323,831 | - | Shewana3_1125 | 0.16 | +0.4 | |
1,323,885 | + | Shewana3_1125 | 0.18 | +0.9 | |
1,323,933 | + | Shewana3_1125 | 0.19 | -0.3 | |
1,323,940 | - | Shewana3_1125 | 0.20 | +2.1 | |
1,324,082 | + | Shewana3_1125 | 0.25 | +0.3 |
Or see this region's nucleotide sequence