Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1008

Experiment: Fusidic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.5 mg/ml
1,177,672	-		Shewana3_1007	0.46	-1.7
1,177,765	-		Shewana3_1007	0.55	-1.1
1,177,994	-		Shewana3_1007	0.76	-1.3
1,178,046	-		Shewana3_1007	0.81	+2.0
1,178,396	+				-0.6
1,178,396	-				-1.7
1,178,396	-				-1.0
1,178,456	-				+0.3
1,178,476	-				+0.4
1,178,507	+				+1.3
1,178,515	-				+0.5
1,178,522	-				+1.5
1,178,717	-		Shewana3_1008	0.15	+1.5
1,178,777	+		Shewana3_1008	0.19	+0.4
1,178,782	+				+2.0
1,178,785	-		Shewana3_1008	0.19	+1.9
1,178,785	-		Shewana3_1008	0.19	+1.8
1,178,785	-		Shewana3_1008	0.19	+1.7
1,178,834	+		Shewana3_1008	0.23	-1.2
1,179,074	+		Shewana3_1008	0.40	+1.0
1,179,074	+		Shewana3_1008	0.40	-1.6
1,179,082	-		Shewana3_1008	0.40	+1.1
1,179,082	-		Shewana3_1008	0.40	+1.0
1,179,197	-		Shewana3_1008	0.48	+0.7
1,179,247	-		Shewana3_1008	0.52	+1.3
1,179,285	+		Shewana3_1008	0.54	-0.3
1,179,299	+		Shewana3_1008	0.55	+2.0
1,179,343	+		Shewana3_1008	0.58	-0.3
1,179,367	-		Shewana3_1008	0.60	+2.2
1,179,439	-		Shewana3_1008	0.65	+1.3
1,179,455	-		Shewana3_1008	0.66	+2.6
1,179,490	+		Shewana3_1008	0.69	+1.0
1,179,517	-		Shewana3_1008	0.71	+2.5
1,179,792	+				+1.0
1,179,837	+				-0.3
1,179,889	-				+2.5
1,179,945	+				-2.3
1,179,979	+				-0.2
1,180,161	+		Shewana3_1009	0.26	+2.1
1,180,218	-		Shewana3_1009	0.43	+1.1
1,180,271	+		Shewana3_1009	0.59	+0.3
1,180,271	+		Shewana3_1009	0.59	-0.9
1,180,514	-				-1.0
1,180,521	+				+1.0
1,180,526	+				-0.7
1,180,534	+				-1.1
1,180,534	-				-0.1
1,180,550	-				-0.8
1,180,648	+				-1.2
1,180,705	+				+0.3
1,180,713	-				+3.2