Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0904

Experiment: Fusidic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.5 mg/ml
1,053,832	+		Shewana3_0903	0.56	+1.1
1,053,926	+		Shewana3_0903	0.69	+1.2
1,054,182	+				+0.5
1,054,190	-				-1.9
1,054,217	+				+0.1
1,054,558	+				-1.0
1,054,558	+				+0.0
1,054,565	-				+2.3
1,054,816	+				-3.0
1,054,883	-				-0.9
1,054,921	+				+0.3
1,054,929	-				-1.6
1,055,080	+		Shewana3_0904	0.11	-0.1
1,055,152	-		Shewana3_0904	0.14	+0.4
1,055,216	-		Shewana3_0904	0.16	-0.5
1,055,468	-		Shewana3_0904	0.26	-0.1
1,055,614	+		Shewana3_0904	0.31	+0.8
1,055,622	-		Shewana3_0904	0.32	+0.4
1,055,622	-		Shewana3_0904	0.32	-2.3
1,055,637	+		Shewana3_0904	0.32	-0.9
1,055,890	+		Shewana3_0904	0.42	-0.7
1,055,966	+		Shewana3_0904	0.45	+0.4
1,055,985	+		Shewana3_0904	0.46	-2.4
1,056,031	-		Shewana3_0904	0.47	+0.6
1,056,111	-		Shewana3_0904	0.50	-1.0
1,056,374	+		Shewana3_0904	0.61	+0.7
1,056,394	+		Shewana3_0904	0.61	+0.6
1,056,548	+		Shewana3_0904	0.67	+0.9
1,056,570	+		Shewana3_0904	0.68	+0.4
1,056,656	+		Shewana3_0904	0.71	+1.8
1,056,741	+		Shewana3_0904	0.75	+1.1
1,056,759	+		Shewana3_0904	0.75	+0.2
1,056,799	+		Shewana3_0904	0.77	+1.4
1,056,807	-		Shewana3_0904	0.77	-0.8
1,056,807	-		Shewana3_0904	0.77	-1.0
1,056,851	-		Shewana3_0904	0.79	+1.2
1,056,909	-		Shewana3_0904	0.81	-0.5
1,056,967	+		Shewana3_0904	0.83	+1.0
1,057,092	-		Shewana3_0904	0.88	+0.4
1,057,112	-		Shewana3_0904	0.89	+0.5
1,057,112	-		Shewana3_0904	0.89	+0.7
1,057,117	-		Shewana3_0904	0.89	+1.3
1,057,126	+		Shewana3_0904	0.89	+0.5
1,057,182	+				+1.9
1,057,287	+				+2.1
1,057,453	-				+0.4
1,057,519	-				+0.7
1,057,673	-		Shewana3_0905	0.30	+0.4
1,057,894	-		Shewana3_0905	0.79	+0.3
1,058,009	+				+0.0
1,058,009	+				+1.7
1,058,009	+				+0.8
1,058,037	+				+1.7
1,058,124	+				+0.5
1,058,132	-				-1.4
1,058,281	-		Shewana3_0906	0.42	-0.2
1,058,405	+		Shewana3_0906	0.70	+0.8