Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0889

Experiment: Fusidic 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.5 mg/ml
1,034,056	+		Shewana3_0888	0.60	+0.7
1,034,080	-		Shewana3_0888	0.62	-2.0
1,034,179	-		Shewana3_0888	0.68	-1.2
1,034,179	-		Shewana3_0888	0.68	-0.7
1,034,181	-		Shewana3_0888	0.69	-0.7
1,034,292	-		Shewana3_0888	0.76	-2.7
1,034,321	-		Shewana3_0888	0.78	-0.0
1,034,321	-		Shewana3_0888	0.78	-0.5
1,034,428	+		Shewana3_0888	0.85	+2.0
1,034,543	+				+2.1
1,034,638	+				-1.2
1,034,687	-				-0.4
1,034,727	-				+0.5
1,034,812	+				+1.4
1,034,875	-				-0.0
1,035,028	-				-1.0
1,035,065	+				+0.8
1,035,111	+	mdoD	Shewana3_0889	0.13	+0.6
1,035,125	-	mdoD	Shewana3_0889	0.13	+1.1
1,035,272	-	mdoD	Shewana3_0889	0.22	-1.2
1,035,282	-	mdoD	Shewana3_0889	0.23	+0.0
1,035,282	-	mdoD	Shewana3_0889	0.23	+0.4
1,035,331	-	mdoD	Shewana3_0889	0.26	+0.6
1,035,386	+	mdoD	Shewana3_0889	0.29	+1.0
1,035,442	-	mdoD	Shewana3_0889	0.32	-0.3
1,035,442	-	mdoD	Shewana3_0889	0.32	+0.0
1,035,547	-	mdoD	Shewana3_0889	0.39	-1.8
1,035,554	+	mdoD	Shewana3_0889	0.39	+1.4
1,035,562	-	mdoD	Shewana3_0889	0.39	-1.1
1,035,630	+	mdoD	Shewana3_0889	0.43	+1.6
1,035,663	-	mdoD	Shewana3_0889	0.45	+1.3
1,035,772	+	mdoD	Shewana3_0889	0.52	+1.7
1,035,844	+	mdoD	Shewana3_0889	0.56	+0.9
1,036,012	+	mdoD	Shewana3_0889	0.66	+1.0
1,036,032	-	mdoD	Shewana3_0889	0.67	-1.0
1,036,086	+	mdoD	Shewana3_0889	0.71	+0.5
1,036,141	-	mdoD	Shewana3_0889	0.74	-1.0
1,036,151	-	mdoD	Shewana3_0889	0.75	+1.9
1,036,218	+	mdoD	Shewana3_0889	0.79	+2.8
1,036,218	+	mdoD	Shewana3_0889	0.79	+1.6
1,036,226	-	mdoD	Shewana3_0889	0.79	+1.0
1,036,419	+				+2.1
1,036,505	+				+1.7
1,036,579	+				+0.2
1,036,656	+				+1.8
1,036,664	-				+0.1
1,036,751	+		Shewana3_0890	0.12	-0.3
1,036,995	-		Shewana3_0890	0.46	-0.5
1,037,413	-				-0.3