Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03650

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
3,807,021	+				-0.9
3,807,042	-		CCNA_03649	0.12	-1.0
3,807,050	+		CCNA_03649	0.12	-0.1
3,807,060	+		CCNA_03649	0.13	+0.1
3,807,079	+		CCNA_03649	0.15	+0.6
3,807,092	-		CCNA_03649	0.16	-1.5
3,807,128	+		CCNA_03649	0.20	-0.8
3,807,128	+		CCNA_03649	0.20	+0.7
3,807,131	-		CCNA_03649	0.20	+0.1
3,807,133	+		CCNA_03649	0.20	-0.1
3,807,136	-		CCNA_03649	0.20	+1.1
3,807,143	+		CCNA_03649	0.21	-0.8
3,807,144	-		CCNA_03649	0.21	-1.0
3,807,177	+		CCNA_03649	0.24	-1.3
3,807,179	+		CCNA_03649	0.24	-0.4
3,807,199	+		CCNA_03649	0.26	+0.5
3,807,206	+		CCNA_03649	0.27	-0.9
3,807,206	+		CCNA_03649	0.27	+0.4
3,807,211	+		CCNA_03649	0.27	-1.8
3,807,219	-		CCNA_03649	0.28	-0.1
3,807,262	-		CCNA_03649	0.32	+0.9
3,807,286	+		CCNA_03649	0.34	+0.7
3,807,294	-		CCNA_03649	0.35	-1.4
3,807,361	-		CCNA_03649	0.41	-2.1
3,807,386	+		CCNA_03649	0.43	+0.5
3,807,409	-		CCNA_03649	0.45	-1.9
3,807,431	-		CCNA_03649	0.47	+0.5
3,807,437	+		CCNA_03649	0.48	+0.6
3,807,437	+		CCNA_03649	0.48	-0.8
3,807,437	+		CCNA_03649	0.48	-1.4
3,807,439	+		CCNA_03649	0.48	+0.5
3,807,544	-		CCNA_03649	0.58	-2.0
3,807,555	-		CCNA_03649	0.59	-1.6
3,807,555	-		CCNA_03649	0.59	-1.1
3,807,561	-		CCNA_03649	0.59	+0.1
3,807,607	+				-0.4
3,807,616	+		CCNA_03649	0.64	-0.1
3,807,668	+		CCNA_03649	0.69	+0.2
3,807,668	+		CCNA_03649	0.69	+1.5
3,807,668	+		CCNA_03649	0.69	+0.7
3,807,668	+		CCNA_03649	0.69	+1.9
3,807,668	+		CCNA_03649	0.69	+0.9
3,807,668	+		CCNA_03649	0.69	+0.4
3,807,676	-		CCNA_03649	0.70	-0.9
3,807,676	-		CCNA_03649	0.70	+1.4
3,807,676	-		CCNA_03649	0.70	-0.1
3,807,693	+		CCNA_03649	0.71	+1.4
3,807,736	+		CCNA_03649	0.75	+0.0
3,807,757	-		CCNA_03649	0.77	-0.8
3,807,772	-		CCNA_03649	0.78	-1.0
3,807,779	+		CCNA_03649	0.79	+0.5
3,807,779	+		CCNA_03649	0.79	+0.4
3,807,782	-		CCNA_03649	0.79	-0.9
3,807,816	+		CCNA_03649	0.83	-1.0
3,807,897	+				-0.7
3,807,910	+				+0.1
3,807,910	+				-1.2
3,807,921	+				+0.1
3,807,921	+				-1.3
3,807,928	+				+3.2
3,807,929	-				-1.2
3,807,929	-				-1.1
3,807,972	-				-0.2
3,807,986	-				-0.6
3,808,088	+		CCNA_03650	0.12	+0.4
3,808,202	-		CCNA_03650	0.27	+0.6
3,808,299	+		CCNA_03650	0.41	-0.9
3,808,429	+		CCNA_03650	0.58	-0.1
3,808,513	-		CCNA_03650	0.70	-0.1
3,808,569	+		CCNA_03650	0.78	-0.4
3,808,569	+		CCNA_03650	0.78	+0.1
3,808,719	-				+0.3
3,808,725	+				+0.2
3,808,733	-				-1.9
3,808,823	+				-1.8
3,808,846	+				-0.9
3,808,867	+				-1.1
3,808,875	-				+0.1
3,809,015	+				+0.6
3,809,023	-				-1.1
3,809,135	+		CCNA_03651	0.14	-2.0
3,809,135	+		CCNA_03651	0.14	+0.8
3,809,206	+		CCNA_03651	0.16	+0.9
3,809,206	+		CCNA_03651	0.16	+1.4
3,809,206	+		CCNA_03651	0.16	+2.3
3,809,229	-		CCNA_03651	0.17	-0.1
3,809,231	+		CCNA_03651	0.17	+0.5
3,809,231	+		CCNA_03651	0.17	-1.1
3,809,247	+		CCNA_03651	0.17	+0.4
3,809,286	+		CCNA_03651	0.19	-0.9
3,809,288	+		CCNA_03651	0.19	-0.1
3,809,288	+		CCNA_03651	0.19	+0.2
3,809,296	+		CCNA_03651	0.19	+0.5
3,809,296	+		CCNA_03651	0.19	+1.7
3,809,296	+		CCNA_03651	0.19	-0.4
3,809,296	+		CCNA_03651	0.19	+1.1
3,809,296	+		CCNA_03651	0.19	+0.7
3,809,296	-		CCNA_03651	0.19	-0.6
3,809,313	-		CCNA_03651	0.20	-0.9
3,809,352	-		CCNA_03651	0.21	-0.6
3,809,352	-		CCNA_03651	0.21	+0.1
3,809,365	+		CCNA_03651	0.21	+0.6
3,809,440	-		CCNA_03651	0.24	-0.2
3,809,499	-		CCNA_03651	0.26	-1.5
3,809,510	+		CCNA_03651	0.26	-1.1
3,809,524	-		CCNA_03651	0.27	+0.9
3,809,583	-		CCNA_03651	0.29	+0.9
3,809,646	-		CCNA_03651	0.31	-0.2