Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03183

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
3,341,319	-		CCNA_03181	0.70	-0.6
3,341,387	+		CCNA_03181	0.76	-0.0
3,341,390	-		CCNA_03181	0.76	-1.3
3,341,390	-		CCNA_03181	0.76	+1.3
3,341,400	-		CCNA_03181	0.77	+0.3
3,341,411	+		CCNA_03181	0.77	-0.9
3,341,450	+		CCNA_03181	0.80	-0.8
3,341,476	-		CCNA_03181	0.83	-0.7
3,341,494	+		CCNA_03181	0.84	-0.2
3,341,544	+		CCNA_03181	0.88	-0.8
3,341,600	+				+0.9
3,341,603	-				+0.1
3,341,617	+				-0.4
3,341,625	-				-1.0
3,341,627	+				+1.2
3,341,632	+				-0.7
3,341,632	+				-1.3
3,341,635	-				-0.9
3,341,640	-				-0.2
3,341,646	+				-1.2
3,341,654	-				-0.9
3,341,654	-				-0.8
3,341,680	+				+0.7
3,341,696	-				-1.2
3,341,702	+				-0.4
3,341,747	+				+1.6
3,341,811	-				-1.8
3,341,854	-				+0.3
3,341,880	+				+1.1
3,341,882	+				+1.4
3,341,895	-				-1.1
3,341,905	+		CCNA_03182	0.12	+2.2
3,341,920	+		CCNA_03182	0.16	+2.0
3,341,964	-		CCNA_03182	0.27	-0.6
3,341,995	-		CCNA_03182	0.36	-0.7
3,342,113	+		CCNA_03182	0.67	-0.0
3,342,113	+		CCNA_03182	0.67	+0.5
3,342,113	+		CCNA_03182	0.67	+0.4
3,342,113	+		CCNA_03182	0.67	+0.2
3,342,113	+		CCNA_03182	0.67	+0.4
3,342,113	+		CCNA_03182	0.67	-1.0
3,342,113	+		CCNA_03182	0.67	-1.3
3,342,113	+		CCNA_03182	0.67	-1.3
3,342,113	+		CCNA_03182	0.67	+0.1
3,342,113	+		CCNA_03182	0.67	+0.5
3,342,125	+		CCNA_03182	0.71	+2.3
3,342,151	+		CCNA_03182	0.78	-2.8
3,342,162	+		CCNA_03182	0.81	-0.7
3,342,169	+		CCNA_03182	0.83	+0.1
3,342,169	+		CCNA_03182	0.83	-1.6
3,342,177	-		CCNA_03182	0.85	+0.3
3,342,204	+				-1.7
3,342,212	-				-1.2
3,342,212	-				+0.3
3,342,212	-				+0.7
3,342,212	-				+0.6
3,342,212	-				-0.3
3,342,213	-				+0.2
3,342,222	-				+0.6
3,342,254	+				-0.3
3,342,292	+				+0.3
3,342,295	-				+0.2
3,342,315	-				+0.3
3,342,315	-				+0.2
3,342,321	-				+0.8
3,342,354	+				-0.6
3,342,354	+				+0.7
3,342,354	+				+1.3
3,342,354	+				-0.8
3,342,354	+				+0.6
3,342,354	+				+1.0
3,342,362	-				+0.1
3,342,362	-				-0.0
3,342,362	-				+0.2
3,342,362	-				+0.9
3,342,362	-				+0.4
3,342,362	-				-0.5
3,342,362	-				+0.2
3,342,362	-				-0.3
3,342,420	-				+1.3
3,342,432	-				+0.2
3,342,434	+				+0.6
3,342,435	+				-0.9
3,342,454	-		CCNA_03183	0.10	+0.0
3,342,462	+		CCNA_03183	0.11	-0.8
3,342,471	-		CCNA_03183	0.11	+0.8
3,342,521	-		CCNA_03183	0.14	-0.9
3,342,524	+		CCNA_03183	0.15	+0.1
3,342,550	-		CCNA_03183	0.16	+0.1
3,342,550	-		CCNA_03183	0.16	-1.0
3,342,557	+		CCNA_03183	0.17	-2.3
3,342,565	-		CCNA_03183	0.17	+0.4
3,342,605	+				+0.7
3,342,684	+		CCNA_03183	0.24	+2.2
3,342,780	-		CCNA_03183	0.30	+0.4
3,342,803	+		CCNA_03183	0.32	-0.8
3,342,811	-		CCNA_03183	0.32	+0.7
3,342,823	-		CCNA_03183	0.33	-1.5
3,342,847	+		CCNA_03183	0.35	+0.2
3,342,847	+		CCNA_03183	0.35	-0.6
3,342,855	-		CCNA_03183	0.35	-1.0
3,342,855	-		CCNA_03183	0.35	-0.5
3,342,857	+		CCNA_03183	0.35	+0.7
3,342,858	+		CCNA_03183	0.35	-0.2
3,342,894	+		CCNA_03183	0.37	-0.1
3,342,894	+		CCNA_03183	0.37	+0.3
3,342,902	-		CCNA_03183	0.38	-0.6
3,342,902	-		CCNA_03183	0.38	+0.4
3,342,906	+		CCNA_03183	0.38	-1.3
3,342,906	+		CCNA_03183	0.38	+1.0
3,342,906	+		CCNA_03183	0.38	-0.2
3,342,911	+		CCNA_03183	0.39	-1.2
3,342,912	-		CCNA_03183	0.39	+0.9
3,342,914	-		CCNA_03183	0.39	+0.7
3,342,966	+		CCNA_03183	0.42	-0.4
3,342,966	+				+0.7
3,343,003	-		CCNA_03183	0.44	+1.6
3,343,003	-		CCNA_03183	0.44	+1.1
3,343,003	-		CCNA_03183	0.44	-0.5
3,343,018	-		CCNA_03183	0.45	+0.6
3,343,018	-		CCNA_03183	0.45	-0.8
3,343,093	-		CCNA_03183	0.50	+0.2
3,343,140	+		CCNA_03183	0.53	-0.9
3,343,141	-		CCNA_03183	0.53	-0.4
3,343,216	+		CCNA_03183	0.57	-1.1
3,343,222	+		CCNA_03183	0.58	-0.2
3,343,222	+		CCNA_03183	0.58	-1.5
3,343,229	-		CCNA_03183	0.58	-0.3
3,343,233	+		CCNA_03183	0.59	+0.6
3,343,241	-		CCNA_03183	0.59	-0.9
3,343,241	-		CCNA_03183	0.59	+0.4
3,343,269	+		CCNA_03183	0.61	-2.1
3,343,289	-		CCNA_03183	0.62	+0.1
3,343,294	-		CCNA_03183	0.62	+0.1
3,343,302	+		CCNA_03183	0.63	+0.5
3,343,326	+		CCNA_03183	0.64	+0.5
3,343,340	+		CCNA_03183	0.65	-0.2
3,343,345	+		CCNA_03183	0.65	-0.2
3,343,356	+		CCNA_03183	0.66	-1.1
3,343,364	-		CCNA_03183	0.67	-0.4
3,343,409	-		CCNA_03183	0.69	-0.5
3,343,420	-		CCNA_03183	0.70	-0.1
3,343,450	+		CCNA_03183	0.72	+0.8
3,343,456	+		CCNA_03183	0.72	-0.5
3,343,456	+		CCNA_03183	0.72	-2.0
3,343,457	+		CCNA_03183	0.72	-0.6
3,343,457	+		CCNA_03183	0.72	-1.4
3,343,464	-		CCNA_03183	0.73	+1.2
3,343,464	-		CCNA_03183	0.73	-0.2
3,343,469	+		CCNA_03183	0.73	+0.7
3,343,482	-		CCNA_03183	0.74	-0.5
3,343,483	-		CCNA_03183	0.74	+0.8
3,343,540	+		CCNA_03183	0.78	+0.5
3,343,540	+		CCNA_03183	0.78	-0.4
3,343,540	+		CCNA_03183	0.78	-0.4
3,343,540	+		CCNA_03183	0.78	-0.5
3,343,540	+		CCNA_03183	0.78	-1.6
3,343,540	+		CCNA_03183	0.78	-0.7
3,343,548	-		CCNA_03183	0.78	-1.0
3,343,548	-		CCNA_03183	0.78	-1.4
3,343,548	-		CCNA_03183	0.78	-0.3
3,343,548	-		CCNA_03183	0.78	+1.8
3,343,548	-		CCNA_03183	0.78	-1.6
3,343,548	-		CCNA_03183	0.78	+0.3
3,343,577	-		CCNA_03183	0.80	-0.0
3,343,578	+		CCNA_03183	0.80	-1.9
3,343,586	-		CCNA_03183	0.80	-0.2
3,343,586	-		CCNA_03183	0.80	+0.8
3,343,592	+		CCNA_03183	0.81	-2.2
3,343,600	-		CCNA_03183	0.81	+0.1
3,343,614	+		CCNA_03183	0.82	+0.1
3,343,614	+		CCNA_03183	0.82	-0.4
3,343,614	+		CCNA_03183	0.82	-0.2
3,343,616	-		CCNA_03183	0.82	-0.4
3,343,622	+		CCNA_03183	0.83	-0.8
3,343,622	-		CCNA_03183	0.83	+2.0
3,343,686	+		CCNA_03183	0.87	+2.4
3,343,692	+		CCNA_03183	0.87	+0.2
3,343,694	-		CCNA_03183	0.87	+0.3
3,343,697	+		CCNA_03183	0.87	-0.9
3,343,700	-		CCNA_03183	0.88	+0.1
3,343,733	+		CCNA_03183	0.90	-0.6
3,343,741	-				-0.9
3,343,741	-				-0.2
3,343,848	-				+2.0
3,343,854	-				-0.9
3,343,854	-				-0.2
3,343,887	+				+0.2
3,343,897	+				+0.5
3,343,897	+				+0.0
3,343,897	+				+1.1
3,343,897	+				-0.0
3,343,897	+				+0.6
3,343,905	-				+0.8
3,343,905	-				-0.0
3,343,923	+				-1.6
3,343,923	-				+1.3
3,344,011	-				-0.4
3,344,019	-				+0.5
3,344,033	-				+0.8
3,344,037	+				-2.2
3,344,058	-				+0.9
3,344,070	+				-0.9
3,344,087	+				+1.3
3,344,101	-				+0.4
3,344,101	-				+0.3
3,344,141	+				+1.3
3,344,218	+				-1.2
3,344,242	+		CCNA_03184	0.11	+0.9
3,344,277	+		CCNA_03184	0.13	-0.7
3,344,322	+		CCNA_03184	0.16	-1.6
3,344,322	+		CCNA_03184	0.16	-1.1
3,344,322	+		CCNA_03184	0.16	-1.2
3,344,330	-		CCNA_03184	0.16	-1.2
3,344,330	-		CCNA_03184	0.16	-0.5
3,344,330	-		CCNA_03184	0.16	+1.1
3,344,330	-		CCNA_03184	0.16	+1.6
3,344,330	-		CCNA_03184	0.16	+1.5
3,344,330	-		CCNA_03184	0.16	-0.4
3,344,330	-		CCNA_03184	0.16	+1.1
3,344,374	-		CCNA_03184	0.19	-0.1
3,344,386	+		CCNA_03184	0.20	-0.7
3,344,386	+		CCNA_03184	0.20	-1.0
3,344,395	-		CCNA_03184	0.20	-1.4
3,344,409	+		CCNA_03184	0.21	-0.7
3,344,410	-		CCNA_03184	0.21	+1.4
3,344,410	-		CCNA_03184	0.21	-0.4
3,344,410	-		CCNA_03184	0.21	-0.3
3,344,436	+		CCNA_03184	0.23	+1.6
3,344,446	+		CCNA_03184	0.23	-2.4
3,344,454	-		CCNA_03184	0.24	+0.4
3,344,470	+		CCNA_03184	0.25	+1.0
3,344,474	-		CCNA_03184	0.25	-0.5
3,344,474	-		CCNA_03184	0.25	-0.6
3,344,483	+		CCNA_03184	0.25	+0.5
3,344,503	+		CCNA_03184	0.26	-1.3
3,344,536	-		CCNA_03184	0.28	-1.9
3,344,581	+		CCNA_03184	0.31	-0.7
3,344,589	-		CCNA_03184	0.32	+1.4
3,344,589	-		CCNA_03184	0.32	+0.8
3,344,609	+		CCNA_03184	0.33	-0.5
3,344,621	+		CCNA_03184	0.33	-0.0
3,344,665	+		CCNA_03184	0.36	-0.0
3,344,665	+				+2.7
3,344,665	+		CCNA_03184	0.36	-1.1
3,344,673	-		CCNA_03184	0.37	-0.1
3,344,703	+		CCNA_03184	0.38	+1.7
3,344,708	+		CCNA_03184	0.39	-1.2
3,344,725	+		CCNA_03184	0.40	+0.4
3,344,732	+		CCNA_03184	0.40	-1.4
3,344,740	-		CCNA_03184	0.40	+0.6
3,344,804	-		CCNA_03184	0.44	+0.1
3,344,809	-		CCNA_03184	0.45	+1.5