Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03052

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
3,205,213	-		CCNA_03050	0.76	-0.3
3,205,213	-		CCNA_03050	0.76	-0.5
3,205,234	+		CCNA_03050	0.79	-2.5
3,205,256	-		CCNA_03050	0.82	+0.0
3,205,263	+		CCNA_03050	0.83	+0.2
3,205,271	-		CCNA_03050	0.84	-0.7
3,205,277	+		CCNA_03050	0.85	+0.4
3,205,299	+		CCNA_03050	0.88	+0.3
3,205,379	+				-0.3
3,205,379	+				+1.1
3,205,390	+				-1.1
3,205,397	-				-0.7
3,205,397	-				-0.9
3,205,397	-				+0.6
3,205,483	+				+0.4
3,205,483	+				-0.7
3,205,483	+				+0.5
3,205,483	+				+0.3
3,205,483	+				+0.4
3,205,483	+				-0.2
3,205,491	-				-0.7
3,205,491	-				-1.6
3,205,491	-				-1.1
3,205,491	-				-1.1
3,205,491	-				+0.1
3,205,504	+				+0.2
3,205,504	+				-1.2
3,205,504	+				+0.5
3,205,504	+				+0.5
3,205,512	-				+0.2
3,205,523	+				+1.6
3,205,587	-				-0.2
3,205,642	+		CCNA_03051	0.17	+0.9
3,205,642	+		CCNA_03051	0.17	-0.5
3,205,649	+		CCNA_03051	0.19	-2.4
3,205,649	+		CCNA_03051	0.19	+1.6
3,205,649	+		CCNA_03051	0.19	-0.2
3,205,649	+		CCNA_03051	0.19	+0.4
3,205,649	+		CCNA_03051	0.19	-0.5
3,205,649	+		CCNA_03051	0.19	+1.0
3,205,649	+		CCNA_03051	0.19	-0.2
3,205,654	+		CCNA_03051	0.20	-1.2
3,205,657	-				+1.6
3,205,657	-		CCNA_03051	0.21	+0.8
3,205,683	+		CCNA_03051	0.28	-1.8
3,205,685	-				+2.2
3,205,712	-		CCNA_03051	0.35	-0.9
3,205,713	+		CCNA_03051	0.35	-0.7
3,205,733	+		CCNA_03051	0.40	-2.2
3,205,746	+		CCNA_03051	0.43	-1.2
3,205,781	-		CCNA_03051	0.52	+0.6
3,205,829	-		CCNA_03051	0.64	-0.4
3,205,836	-		CCNA_03051	0.66	-1.4
3,205,836	-		CCNA_03051	0.66	+1.6
3,205,870	-		CCNA_03051	0.74	+1.0
3,205,890	-		CCNA_03051	0.79	+1.1
3,205,908	+		CCNA_03051	0.84	-0.7
3,205,916	-		CCNA_03051	0.86	+0.4
3,205,938	+				-0.8
3,205,956	+				-1.1
3,205,956	+				-0.2
3,205,956	+				-1.1
3,206,009	+				-0.7
3,206,009	+				+0.0
3,206,009	+				-1.0
3,206,017	-				-0.8
3,206,142	-				+0.6
3,206,152	-				+1.0
3,206,267	-				-2.1
3,206,356	-		CCNA_03052	0.15	+0.1
3,206,372	-		CCNA_03052	0.17	-0.2
3,206,394	-		CCNA_03052	0.19	-2.6
3,206,514	-		CCNA_03052	0.29	-0.5
3,206,620	-		CCNA_03052	0.38	-0.1
3,206,802	-		CCNA_03052	0.53	+0.8
3,206,804	-		CCNA_03052	0.54	-1.9
3,206,960	-		CCNA_03052	0.67	-0.7
3,207,012	-		CCNA_03052	0.71	-1.8
3,207,036	-		CCNA_03052	0.73	-0.1
3,207,092	-		CCNA_03052	0.78	-1.2
3,207,289	-				-0.4
3,207,353	-				+0.6
3,207,367	-				-0.5
3,207,390	+				-0.9
3,207,462	+				+0.8
3,207,470	-				-0.9
3,207,485	+				-0.8
3,207,516	+				-0.7
3,207,526	+				-1.4
3,207,556	+		CCNA_03053	0.12	-0.2
3,207,572	+		CCNA_03053	0.14	-0.9
3,207,572	+		CCNA_03053	0.14	-2.2
3,207,572	+		CCNA_03053	0.14	-0.0
3,207,572	+		CCNA_03053	0.14	-1.0
3,207,580	-		CCNA_03053	0.15	-2.6
3,207,580	-		CCNA_03053	0.15	+0.7
3,207,580	-		CCNA_03053	0.15	-1.9
3,207,675	+		CCNA_03053	0.27	-1.1
3,207,688	-		CCNA_03053	0.29	+0.3
3,207,695	+		CCNA_03053	0.30	-1.2
3,207,695	+		CCNA_03053	0.30	-0.9
3,207,695	+		CCNA_03053	0.30	-2.1
3,207,703	-		CCNA_03053	0.31	+1.2
3,207,703	-		CCNA_03053	0.31	-1.4
3,207,852	-		CCNA_03053	0.50	+0.8
3,207,887	+		CCNA_03053	0.55	-1.6
3,207,938	-		CCNA_03053	0.61	+0.6
3,207,989	+		CCNA_03053	0.68	-0.9
3,207,996	+		CCNA_03053	0.69	-0.1
3,207,996	+		CCNA_03053	0.69	-0.4
3,207,996	+		CCNA_03053	0.69	-0.9
3,207,999	-		CCNA_03053	0.69	-1.2
3,208,001	+		CCNA_03053	0.70	-1.2
3,208,001	+		CCNA_03053	0.70	+0.2
3,208,001	+		CCNA_03053	0.70	+0.4
3,208,001	+		CCNA_03053	0.70	-2.1
3,208,001	+		CCNA_03053	0.70	-1.1
3,208,001	+		CCNA_03053	0.70	+0.1
3,208,001	+		CCNA_03053	0.70	-1.6
3,208,009	-		CCNA_03053	0.71	-1.6
3,208,009	-		CCNA_03053	0.71	-0.6
3,208,009	-		CCNA_03053	0.71	+0.1
3,208,009	-		CCNA_03053	0.71	-1.6
3,208,009	-		CCNA_03053	0.71	-1.3
3,208,009	-		CCNA_03053	0.71	-1.0
3,208,009	-		CCNA_03053	0.71	+1.1
3,208,009	-		CCNA_03053	0.71	-2.4
3,208,009	-		CCNA_03053	0.71	+0.5
3,208,009	-		CCNA_03053	0.71	+0.0
3,208,009	-		CCNA_03053	0.71	+0.7
3,208,009	-		CCNA_03053	0.71	-0.4
3,208,101	+		CCNA_03053	0.82	-2.1
3,208,114	-		CCNA_03053	0.84	-0.8
3,208,116	+		CCNA_03053	0.84	-0.4
3,208,124	-		CCNA_03053	0.85	-1.3
3,208,131	+		CCNA_03053	0.86	-1.2
3,208,173	+				-1.7
3,208,244	+				+1.3
3,208,252	-				+1.5
3,208,252	-				-0.5
3,208,252	-				-1.5
3,208,256	+				+0.3
3,208,256	+				-0.4
3,208,256	+				+0.2
3,208,256	+				+0.5
3,208,256	+				-0.9
3,208,256	+				-0.9
3,208,256	+				+0.3
3,208,256	+				-0.4
3,208,256	+				+2.5
3,208,256	+				+0.4
3,208,264	-				-0.7
3,208,264	-				-0.7
3,208,264	-				-0.2
3,208,264	-				+0.2
3,208,264	-				-1.0
3,208,264	-				-0.6
3,208,264	-				-0.6
3,208,264	-				-1.4
3,208,270	-				+0.2
3,208,279	+				-0.7
3,208,289	+				+0.5
3,208,300	+				+0.1
3,208,300	+				-0.0
3,208,300	+				+0.5
3,208,308	-				+0.7
3,208,308	-				+0.9
3,208,310	+				-0.3
3,208,323	+				+0.2
3,208,324	-				-0.2
3,208,326	+				+1.2
3,208,326	+				+1.2
3,208,326	+				-0.9
3,208,334	-				+1.3
3,208,334	-				+0.8
3,208,339	-				-1.4