Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02715

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
2,874,199	-		CCNA_02714	0.57	-1.6
2,874,199	-		CCNA_02714	0.57	-0.4
2,874,199	-		CCNA_02714	0.57	+0.5
2,874,206	+		CCNA_02714	0.58	+0.1
2,874,255	-		CCNA_02714	0.60	-0.7
2,874,255	-		CCNA_02714	0.60	-0.2
2,874,256	+		CCNA_02714	0.60	-0.3
2,874,263	-		CCNA_02714	0.61	-0.4
2,874,269	-		CCNA_02714	0.61	+0.7
2,874,289	-		CCNA_02714	0.62	+0.5
2,874,300	+		CCNA_02714	0.63	+1.1
2,874,308	-		CCNA_02714	0.63	-0.9
2,874,308	-		CCNA_02714	0.63	-0.2
2,874,322	+		CCNA_02714	0.64	+0.3
2,874,328	+		CCNA_02714	0.64	+0.9
2,874,365	+		CCNA_02714	0.66	-1.5
2,874,408	-		CCNA_02714	0.69	-0.6
2,874,412	+		CCNA_02714	0.69	+0.7
2,874,417	+		CCNA_02714	0.69	+0.1
2,874,420	-		CCNA_02714	0.69	+0.7
2,874,420	-		CCNA_02714	0.69	+0.5
2,874,439	-		CCNA_02714	0.70	-0.7
2,874,439	-		CCNA_02714	0.70	-0.7
2,874,461	+		CCNA_02714	0.71	-0.1
2,874,476	+		CCNA_02714	0.72	+1.8
2,874,484	-		CCNA_02714	0.73	+0.7
2,874,523	+		CCNA_02714	0.75	+0.2
2,874,536	-		CCNA_02714	0.76	-1.6
2,874,573	-		CCNA_02714	0.78	+0.3
2,874,577	+		CCNA_02714	0.78	-1.2
2,874,585	-		CCNA_02714	0.78	+0.4
2,874,591	+		CCNA_02714	0.79	-0.5
2,874,598	+		CCNA_02714	0.79	-0.4
2,874,598	+		CCNA_02714	0.79	+2.3
2,874,599	-		CCNA_02714	0.79	-2.2
2,874,606	-		CCNA_02714	0.79	-0.9
2,874,606	-		CCNA_02714	0.79	-0.7
2,874,610	+				+2.7
2,874,648	-		CCNA_02714	0.82	+2.0
2,874,658	+		CCNA_02714	0.82	+0.3
2,874,702	+		CCNA_02714	0.85	+0.3
2,874,735	+		CCNA_02714	0.86	+0.2
2,874,753	+		CCNA_02714	0.87	-0.6
2,874,753	+		CCNA_02714	0.87	+0.6
2,874,771	-		CCNA_02714	0.88	-1.8
2,874,773	+		CCNA_02714	0.89	-0.3
2,874,773	+		CCNA_02714	0.89	-1.2
2,874,781	-		CCNA_02714	0.89	+0.7
2,874,833	-				-0.8
2,874,835	+				-2.1
2,874,835	+				-1.6
2,874,860	-				+3.3
2,874,861	-				+0.3
2,874,879	+				-0.0
2,874,883	-				-1.3
2,874,903	-				-1.4
2,874,903	-				+0.6
2,874,917	+				+0.2
2,874,975	-				-1.0
2,874,989	+				+0.6
2,875,004	-				+0.9
2,875,009	-				+0.2
2,875,050	+				-0.4
2,875,067	+				-0.9
2,875,067	+				+0.4
2,875,067	+				+0.2
2,875,067	+				-1.5
2,875,067	+				-1.6
2,875,067	+				+0.7
2,875,067	+				-0.2
2,875,067	+				-0.5
2,875,075	-				-0.7
2,875,075	-				-1.0
2,875,075	-				-2.2
2,875,075	-				-1.9
2,875,100	-				-3.1
2,875,100	-				+0.5
2,875,100	-				-2.3
2,875,113	+				-2.3
2,875,113	+				+0.6
2,875,113	+				-0.9
2,875,113	+				+0.1
2,875,120	+				-0.9
2,875,120	+				+1.9
2,875,121	-				-0.3
2,875,137	+				-1.1
2,875,138	-				-0.4
2,875,138	-				+0.5
2,875,138	-				+1.5
2,875,142	+				-1.7
2,875,145	-				+0.4
2,875,145	-				-1.3
2,875,156	-				-0.3
2,875,160	+				-0.0
2,875,178	+				-0.6
2,875,186	-				-2.8
2,875,186	-				-1.5
2,875,204	+				+0.9
2,875,204	+				-0.4
2,875,204	+				-1.0
2,875,204	+				-0.2
2,875,212	-				+0.6
2,875,212	-				-0.2
2,875,234	-				-1.3
2,875,236	-				-1.4
2,875,238	+				-1.9
2,875,287	+				-0.5
2,875,307	+				-1.5
2,875,307	+				-0.1
2,875,315	-				+0.9
2,875,383	+				-0.4
2,875,435	+		CCNA_02715	0.11	-0.1
2,875,450	+		CCNA_02715	0.12	-2.7
2,875,450	+		CCNA_02715	0.12	+1.3
2,875,450	+		CCNA_02715	0.12	-1.1
2,875,450	+		CCNA_02715	0.12	-1.1
2,875,458	-		CCNA_02715	0.13	-0.2
2,875,458	-		CCNA_02715	0.13	-0.5
2,875,472	+		CCNA_02715	0.13	+0.4
2,875,493	+		CCNA_02715	0.14	-1.1
2,875,497	-		CCNA_02715	0.14	+0.1
2,875,520	+		CCNA_02715	0.16	-0.8
2,875,526	-		CCNA_02715	0.16	-1.3
2,875,527	-		CCNA_02715	0.16	-0.4
2,875,540	+		CCNA_02715	0.17	+1.5
2,875,542	+		CCNA_02715	0.17	-1.5
2,875,604	+		CCNA_02715	0.20	-1.7
2,875,609	+		CCNA_02715	0.20	-1.0
2,875,609	+		CCNA_02715	0.20	+1.0
2,875,612	-		CCNA_02715	0.20	-2.1
2,875,622	-		CCNA_02715	0.20	-2.9
2,875,674	-		CCNA_02715	0.23	+0.3
2,875,681	-		CCNA_02715	0.23	-1.0
2,875,685	+		CCNA_02715	0.23	-0.7
2,875,685	+		CCNA_02715	0.23	-2.7
2,875,686	-		CCNA_02715	0.24	-1.1
2,875,716	+		CCNA_02715	0.25	-0.5
2,875,724	-		CCNA_02715	0.25	+0.1
2,875,794	+		CCNA_02715	0.29	-0.4
2,875,805	+		CCNA_02715	0.29	-0.6
2,875,805	+		CCNA_02715	0.29	-0.7
2,875,813	-		CCNA_02715	0.30	-0.5
2,875,813	-		CCNA_02715	0.30	-0.4
2,875,813	-		CCNA_02715	0.30	-0.8
2,875,818	-		CCNA_02715	0.30	-1.7
2,875,818	-		CCNA_02715	0.30	-2.3
2,875,844	+		CCNA_02715	0.31	+3.7
2,875,852	-		CCNA_02715	0.32	-1.1
2,875,852	-				+0.7
2,875,852	-		CCNA_02715	0.32	-1.0
2,875,852	-		CCNA_02715	0.32	-1.4
2,875,852	-		CCNA_02715	0.32	-1.7
2,875,852	-		CCNA_02715	0.32	-1.3
2,875,859	-		CCNA_02715	0.32	-1.1
2,875,938	-		CCNA_02715	0.36	-1.2
2,875,942	+		CCNA_02715	0.36	+0.0
2,875,967	-		CCNA_02715	0.37	-1.4
2,875,976	+		CCNA_02715	0.37	-1.1
2,875,976	+		CCNA_02715	0.37	+0.0
2,875,976	+		CCNA_02715	0.37	+1.1
2,875,981	+		CCNA_02715	0.38	-0.8
2,875,984	-		CCNA_02715	0.38	-1.9
2,875,984	-		CCNA_02715	0.38	-1.6
2,875,984	-		CCNA_02715	0.38	-1.9
2,875,984	-		CCNA_02715	0.38	+0.7
2,875,984	-		CCNA_02715	0.38	-0.6
2,875,984	-		CCNA_02715	0.38	-0.2
2,876,014	+		CCNA_02715	0.39	-1.0
2,876,014	+		CCNA_02715	0.39	-0.1
2,876,014	+		CCNA_02715	0.39	+0.7
2,876,014	-		CCNA_02715	0.39	-1.2
2,876,022	-		CCNA_02715	0.40	-0.1
2,876,022	-		CCNA_02715	0.40	-1.7
2,876,022	-		CCNA_02715	0.40	-0.8
2,876,024	+		CCNA_02715	0.40	-0.5
2,876,029	+		CCNA_02715	0.40	-0.2
2,876,029	+		CCNA_02715	0.40	+0.1
2,876,029	+		CCNA_02715	0.40	-0.2
2,876,037	-		CCNA_02715	0.40	+0.8
2,876,037	-		CCNA_02715	0.40	+0.3
2,876,037	-		CCNA_02715	0.40	-1.4
2,876,079	-		CCNA_02715	0.42	+0.9
2,876,090	+		CCNA_02715	0.43	-2.3
2,876,090	+		CCNA_02715	0.43	+0.5
2,876,113	-		CCNA_02715	0.44	-0.2
2,876,135	-		CCNA_02715	0.45	-1.9
2,876,149	+		CCNA_02715	0.46	-0.3
2,876,149	+		CCNA_02715	0.46	-1.8
2,876,149	+		CCNA_02715	0.46	-0.8
2,876,149	+		CCNA_02715	0.46	-0.6
2,876,149	+		CCNA_02715	0.46	-0.3
2,876,149	+		CCNA_02715	0.46	-0.6
2,876,149	+		CCNA_02715	0.46	-1.9
2,876,149	+		CCNA_02715	0.46	-1.4
2,876,157	-		CCNA_02715	0.46	-0.2
2,876,157	-		CCNA_02715	0.46	+0.0
2,876,157	-		CCNA_02715	0.46	-0.6
2,876,157	-		CCNA_02715	0.46	-0.2
2,876,162	-		CCNA_02715	0.46	+0.1
2,876,171	+		CCNA_02715	0.47	-2.5
2,876,195	+		CCNA_02715	0.48	+0.1
2,876,195	+		CCNA_02715	0.48	-0.5
2,876,195	+		CCNA_02715	0.48	-0.9
2,876,195	+		CCNA_02715	0.48	-0.3
2,876,195	+		CCNA_02715	0.48	-0.5
2,876,197	+		CCNA_02715	0.48	-1.5
2,876,203	-		CCNA_02715	0.48	-1.1
2,876,203	-		CCNA_02715	0.48	-1.6
2,876,203	-		CCNA_02715	0.48	-1.5
2,876,203	-		CCNA_02715	0.48	-0.7
2,876,203	-		CCNA_02715	0.48	-0.5
2,876,203	-		CCNA_02715	0.48	-0.3
2,876,203	-		CCNA_02715	0.48	-1.5
2,876,203	-		CCNA_02715	0.48	-1.5
2,876,208	-		CCNA_02715	0.49	-0.7
2,876,214	+		CCNA_02715	0.49	+2.6
2,876,214	+		CCNA_02715	0.49	-0.6
2,876,215	-		CCNA_02715	0.49	-2.5
2,876,215	-		CCNA_02715	0.49	+0.7
2,876,219	+		CCNA_02715	0.49	-0.1
2,876,222	-		CCNA_02715	0.49	+0.5
2,876,237	+		CCNA_02715	0.50	-0.6
2,876,297	+		CCNA_02715	0.53	-1.5
2,876,305	-		CCNA_02715	0.53	-0.0
2,876,321	+		CCNA_02715	0.54	-0.5
2,876,329	-		CCNA_02715	0.54	-0.4
2,876,329	-		CCNA_02715	0.54	-1.0
2,876,329	-		CCNA_02715	0.54	+0.5
2,876,348	+		CCNA_02715	0.55	-1.3
2,876,353	+		CCNA_02715	0.56	+0.0
2,876,409	+		CCNA_02715	0.58	-0.0
2,876,418	+		CCNA_02715	0.59	-0.7
2,876,418	+		CCNA_02715	0.59	+0.5
2,876,418	+		CCNA_02715	0.59	+0.1
2,876,431	+		CCNA_02715	0.59	+0.4
2,876,438	+		CCNA_02715	0.60	-1.3
2,876,439	-		CCNA_02715	0.60	+0.3
2,876,439	-		CCNA_02715	0.60	-2.3
2,876,458	-		CCNA_02715	0.61	-0.0
2,876,470	+		CCNA_02715	0.61	-0.6
2,876,513	+		CCNA_02715	0.63	-1.5
2,876,533	-		CCNA_02715	0.64	-1.6
2,876,597	+		CCNA_02715	0.67	-1.2
2,876,597	+		CCNA_02715	0.67	-0.9
2,876,605	-		CCNA_02715	0.68	+0.3
2,876,609	-		CCNA_02715	0.68	-0.4
2,876,619	-		CCNA_02715	0.68	+0.1
2,876,641	-		CCNA_02715	0.69	-1.9
2,876,668	-		CCNA_02715	0.71	-1.6
2,876,732	-		CCNA_02715	0.74	-1.7
2,876,732	-		CCNA_02715	0.74	-1.7
2,876,748	-		CCNA_02715	0.75	+0.6
2,876,755	-		CCNA_02715	0.75	+0.1
2,876,777	+		CCNA_02715	0.76	-1.6
2,876,785	+		CCNA_02715	0.76	+2.2
2,876,821	+		CCNA_02715	0.78	-0.7
2,876,822	-		CCNA_02715	0.78	-0.9
2,876,893	+		CCNA_02715	0.82	-0.1
2,876,912	-		CCNA_02715	0.82	-2.3
2,876,924	+		CCNA_02715	0.83	+0.5
2,876,939	+		CCNA_02715	0.84	+1.0
2,876,939	+		CCNA_02715	0.84	-1.2
2,876,947	-		CCNA_02715	0.84	+0.5
2,876,947	-		CCNA_02715	0.84	-0.4
2,876,947	-		CCNA_02715	0.84	-0.7
2,876,952	-		CCNA_02715	0.84	-0.8
2,876,953	+		CCNA_02715	0.84	-1.0
2,876,961	-		CCNA_02715	0.85	-1.9
2,876,992	+		CCNA_02715	0.86	+0.8
2,877,060	-		CCNA_02715	0.90	-0.9
2,877,113	+				-0.9
2,877,155	+				-0.9
2,877,155	+				+2.3
2,877,158	+				-0.1
2,877,217	+				-0.0
2,877,308	+				-1.6
2,877,321	+				+0.2
2,877,321	+				-1.2
2,877,329	-				-1.2
2,877,329	-				+0.2
2,877,329	-				-0.3
2,877,329	-				+0.8
2,877,342	+				-0.3
2,877,342	+				+0.3
2,877,342	+				+0.4
2,877,342	+				-0.0
2,877,342	+				-1.3
2,877,342	+				-0.0
2,877,342	+				+2.0
2,877,350	-				-1.2
2,877,350	-				-1.6
2,877,379	+				+0.4
2,877,471	-		CCNA_02716	0.10	-2.0
2,877,529	-		CCNA_02716	0.16	-1.6
2,877,534	+		CCNA_02716	0.16	-0.8
2,877,534	+		CCNA_02716	0.16	+0.5
2,877,534	+		CCNA_02716	0.16	-0.9
2,877,542	-		CCNA_02716	0.17	-1.5
2,877,542	-		CCNA_02716	0.17	+0.6
2,877,554	+		CCNA_02716	0.18	-0.5
2,877,571	+		CCNA_02716	0.20	-1.0
2,877,576	+		CCNA_02716	0.20	+0.1
2,877,584	-		CCNA_02716	0.21	-0.2
2,877,644	+		CCNA_02716	0.27	+0.1
2,877,690	+		CCNA_02716	0.32	+2.3
2,877,690	+		CCNA_02716	0.32	+0.6
2,877,690	+		CCNA_02716	0.32	-0.2
2,877,690	+		CCNA_02716	0.32	+1.9
2,877,690	+		CCNA_02716	0.32	+0.6
2,877,690	+		CCNA_02716	0.32	+0.4
2,877,693	-		CCNA_02716	0.32	-0.4
2,877,698	-		CCNA_02716	0.33	-0.9
2,877,698	-		CCNA_02716	0.33	-0.3
2,877,698	-		CCNA_02716	0.33	+0.3
2,877,699	-		CCNA_02716	0.33	+0.2
2,877,730	+		CCNA_02716	0.36	+0.1
2,877,733	-		CCNA_02716	0.36	-0.6
2,877,748	+		CCNA_02716	0.38	+0.6
2,877,751	-		CCNA_02716	0.38	-0.5
2,877,756	-		CCNA_02716	0.38	+0.1
2,877,774	+		CCNA_02716	0.40	+1.4
2,877,902	-		CCNA_02716	0.53	+2.0
2,877,923	-		CCNA_02716	0.55	-0.7
2,877,924	+		CCNA_02716	0.55	+0.2
2,877,924	+		CCNA_02716	0.55	+1.0
2,877,932	-		CCNA_02716	0.56	-1.5
2,877,932	-		CCNA_02716	0.56	-0.9
2,877,932	-		CCNA_02716	0.56	-1.0
2,877,932	-		CCNA_02716	0.56	-0.7
2,877,992	-		CCNA_02716	0.62	+0.3
2,878,011	+		CCNA_02716	0.64	+0.5
2,878,033	+		CCNA_02716	0.66	+1.7
2,878,056	+		CCNA_02716	0.68	+0.1
2,878,069	+		CCNA_02716	0.70	-2.1
2,878,077	-		CCNA_02716	0.70	-0.4
2,878,099	+		CCNA_02716	0.73	+1.3
2,878,113	+		CCNA_02716	0.74	-0.4
2,878,125	+		CCNA_02716	0.75	-0.7
2,878,125	+		CCNA_02716	0.75	-0.9
2,878,125	+		CCNA_02716	0.75	+0.6
2,878,150	-		CCNA_02716	0.78	-1.3
2,878,172	+		CCNA_02716	0.80	+1.0