Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02650

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
2,802,885	-		CCNA_02648	0.71	-0.3
2,802,887	+		CCNA_02648	0.71	-0.1
2,802,926	-		CCNA_02648	0.75	-2.4
2,802,926	-		CCNA_02648	0.75	-1.5
2,802,991	-		CCNA_02648	0.82	-2.0
2,803,020	+		CCNA_02648	0.86	+0.5
2,803,063	+				+1.2
2,803,076	+				-2.2
2,803,084	-				-0.8
2,803,143	-				-0.4
2,803,154	-				-0.3
2,803,210	-				-1.7
2,803,226	+				-1.4
2,803,257	+		CCNA_02649	0.13	+0.3
2,803,271	-		CCNA_02649	0.15	-0.7
2,803,374	+		CCNA_02649	0.32	+0.1
2,803,382	-		CCNA_02649	0.33	-0.4
2,803,382	-		CCNA_02649	0.33	+1.0
2,803,414	-		CCNA_02649	0.39	-0.4
2,803,478	-		CCNA_02649	0.49	+0.9
2,803,510	+		CCNA_02649	0.54	-1.6
2,803,512	-		CCNA_02649	0.55	-0.1
2,803,520	+		CCNA_02649	0.56	-0.9
2,803,520	+		CCNA_02649	0.56	-2.9
2,803,621	+		CCNA_02649	0.72	-0.3
2,803,722	+		CCNA_02649	0.89	-1.1
2,803,723	-		CCNA_02649	0.89	-1.2
2,803,742	+				+0.3
2,803,742	+				+0.9
2,803,747	+				-2.2
2,803,750	-				+1.2
2,803,859	-				-1.8
2,803,936	+		CCNA_02650	0.20	-0.8
2,803,936	+		CCNA_02650	0.20	-0.3
2,803,944	-		CCNA_02650	0.21	-0.9
2,803,944	-		CCNA_02650	0.21	+0.4
2,803,944	-		CCNA_02650	0.21	+0.1
2,803,944	-		CCNA_02650	0.21	+0.0
2,803,988	+		CCNA_02650	0.27	+0.7
2,803,994	+		CCNA_02650	0.28	-1.7
2,804,048	-		CCNA_02650	0.36	-0.6
2,804,127	+		CCNA_02650	0.46	+0.2
2,804,199	-		CCNA_02650	0.56	-0.4
2,804,199	-		CCNA_02650	0.56	+1.9
2,804,211	+		CCNA_02650	0.58	-0.6
2,804,211	+		CCNA_02650	0.58	-1.5
2,804,219	-		CCNA_02650	0.59	-0.7
2,804,282	-		CCNA_02650	0.68	+0.6
2,804,368	-		CCNA_02650	0.79	-0.4
2,804,443	-		CCNA_02650	0.90	+1.5
2,804,461	-				+0.5
2,804,473	-				-0.7
2,804,495	+				-0.2
2,804,555	+				+0.6
2,804,556	-				+0.8
2,804,585	-				+0.2
2,804,595	+				-2.1
2,804,605	+		CCNA_02651	0.10	-1.0
2,804,651	+		CCNA_02651	0.15	-2.6
2,804,653	-		CCNA_02651	0.16	+0.9
2,804,670	-		CCNA_02651	0.17	+1.8
2,804,687	-		CCNA_02651	0.19	-3.0
2,804,715	+		CCNA_02651	0.22	-1.8
2,804,738	-		CCNA_02651	0.25	-1.3
2,804,760	-		CCNA_02651	0.28	-1.9
2,804,767	+		CCNA_02651	0.28	-2.1
2,804,767	+		CCNA_02651	0.28	-0.9
2,804,807	-		CCNA_02651	0.33	+0.5
2,804,828	-		CCNA_02651	0.35	+0.3
2,804,910	-		CCNA_02651	0.44	+0.2
2,804,911	+		CCNA_02651	0.44	+0.9
2,804,973	+		CCNA_02651	0.51	+0.2
2,804,997	+		CCNA_02651	0.54	-0.3
2,804,999	+		CCNA_02651	0.54	-1.4
2,805,035	+		CCNA_02651	0.58	-1.0
2,805,036	+		CCNA_02651	0.58	-1.1
2,805,036	+		CCNA_02651	0.58	-2.4
2,805,036	+		CCNA_02651	0.58	-1.1
2,805,043	-		CCNA_02651	0.59	-0.5
2,805,084	+		CCNA_02651	0.64	+0.0
2,805,096	+		CCNA_02651	0.65	+1.6
2,805,103	+		CCNA_02651	0.66	-1.4
2,805,104	-		CCNA_02651	0.66	-0.6
2,805,131	+		CCNA_02651	0.69	-2.0
2,805,205	+		CCNA_02651	0.77	-1.5
2,805,215	+		CCNA_02651	0.78	-1.4
2,805,250	+		CCNA_02651	0.82	+0.4
2,805,256	+		CCNA_02651	0.83	-0.3
2,805,295	+		CCNA_02651	0.87	-0.7
2,805,300	+		CCNA_02651	0.88	-1.0
2,805,308	-		CCNA_02651	0.89	-1.1
2,805,308	-		CCNA_02651	0.89	-0.2
2,805,308	-		CCNA_02651	0.89	-0.5
2,805,348	-				-2.1
2,805,363	+				-2.1
2,805,363	+				+1.5
2,805,366	-				-2.2
2,805,367	+				-0.6
2,805,372	+				-1.2
2,805,372	+				-0.2
2,805,375	-				-2.3
2,805,377	+				-0.7
2,805,380	-				-0.4
2,805,401	+				+1.2
2,805,406	+				+1.3
2,805,409	-				+0.4
2,805,414	+				-1.7
2,805,416	+				-2.2
2,805,424	-				+0.8
2,805,424	-				-0.6
2,805,424	-				+1.2
2,805,424	-				-0.5