Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02571

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
2,721,868	-		CCNA_02570	0.42	-0.0
2,721,949	+		CCNA_02570	0.48	-0.5
2,722,028	+		CCNA_02570	0.54	-1.2
2,722,044	+		CCNA_02570	0.55	+0.1
2,722,086	+		CCNA_02570	0.59	-0.7
2,722,170	+		CCNA_02570	0.65	+1.6
2,722,170	+		CCNA_02570	0.65	+0.3
2,722,197	+		CCNA_02570	0.67	-1.3
2,722,224	+		CCNA_02570	0.69	+0.0
2,722,224	+		CCNA_02570	0.69	+0.7
2,722,232	-		CCNA_02570	0.69	+0.8
2,722,250	+		CCNA_02570	0.71	-0.1
2,722,250	-		CCNA_02570	0.71	-0.3
2,722,271	-		CCNA_02570	0.72	-0.4
2,722,292	+		CCNA_02570	0.74	+0.1
2,722,302	+		CCNA_02570	0.75	+0.5
2,722,353	+		CCNA_02570	0.79	-0.2
2,722,370	+		CCNA_02570	0.80	+0.3
2,722,379	-		CCNA_02570	0.80	-1.4
2,722,383	-		CCNA_02570	0.81	-0.4
2,722,383	-		CCNA_02570	0.81	-0.3
2,722,388	+		CCNA_02570	0.81	+1.7
2,722,388	+		CCNA_02570	0.81	+1.0
2,722,388	+		CCNA_02570	0.81	+0.8
2,722,388	+		CCNA_02570	0.81	+1.0
2,722,388	+		CCNA_02570	0.81	-1.4
2,722,388	+		CCNA_02570	0.81	+1.0
2,722,396	-		CCNA_02570	0.82	+1.7
2,722,396	-		CCNA_02570	0.82	-0.6
2,722,396	-		CCNA_02570	0.82	+0.7
2,722,396	-		CCNA_02570	0.82	-1.9
2,722,396	-		CCNA_02570	0.82	-0.6
2,722,401	-		CCNA_02570	0.82	-0.5
2,722,412	-		CCNA_02570	0.83	-1.5
2,722,424	+		CCNA_02570	0.84	+0.9
2,722,446	+		CCNA_02570	0.85	+0.5
2,722,454	-		CCNA_02570	0.86	-1.5
2,722,461	+		CCNA_02570	0.87	-1.2
2,722,467	+		CCNA_02570	0.87	+0.7
2,722,467	+		CCNA_02570	0.87	+0.9
2,722,468	-		CCNA_02570	0.87	-1.5
2,722,475	-		CCNA_02570	0.88	-0.7
2,722,492	+		CCNA_02570	0.89	-0.1
2,722,520	+				+1.3
2,722,525	+				-0.6
2,722,525	+				+1.9
2,722,525	+				-0.2
2,722,531	+				+0.3
2,722,531	+				+0.1
2,722,531	+				-0.0
2,722,537	+				-0.1
2,722,538	+				-1.2
2,722,540	-				-0.6
2,722,548	+				-0.2
2,722,550	+				+0.3
2,722,550	+				-0.6
2,722,550	+				-0.1
2,722,569	+				+0.6
2,722,569	+				-0.4
2,722,569	+				-1.2
2,722,569	+				+1.0
2,722,569	+				+0.7
2,722,569	+				+0.5
2,722,569	+				+1.1
2,722,569	+				+0.0
2,722,569	+				-0.2
2,722,569	+				+0.6
2,722,569	+				+0.3
2,722,569	+				+0.8
2,722,569	+				+0.7
2,722,569	+				+0.2
2,722,569	+				+1.2
2,722,569	+				+0.3
2,722,577	-				-2.9
2,722,577	-				+2.3
2,722,577	-				+0.3
2,722,577	-				-0.0
2,722,577	-				-0.3
2,722,577	-				+0.3
2,722,577	-				-2.1
2,722,577	-				-1.2
2,722,577	-				-1.1
2,722,577	-				-0.0
2,722,577	-				-1.1
2,722,577	-				-0.7
2,722,584	+				+0.6
2,722,589	+				+0.4
2,722,589	+				+2.9
2,722,592	-				-0.2
2,722,594	+				+0.2
2,722,594	+				-1.2
2,722,594	+				+0.8
2,722,594	+				+0.3
2,722,594	+				+0.0
2,722,594	+				+0.9
2,722,594	+				+0.8
2,722,594	+				-0.6
2,722,594	+				-0.1
2,722,594	+				-0.0
2,722,594	+				+1.7
2,722,594	+				+0.3
2,722,594	+				-0.4
2,722,594	+				-0.2
2,722,594	+				-0.5
2,722,594	+				+0.3
2,722,594	+				+0.2
2,722,594	+				-0.6
2,722,597	-				+0.1
2,722,602	-				-2.0
2,722,602	-				+0.2
2,722,602	-				-0.5
2,722,602	-				+0.7
2,722,602	-				-0.1
2,722,602	-				-0.3
2,722,602	-				+0.8
2,722,602	-				+0.7
2,722,602	-				-0.0
2,722,602	-				-0.4
2,722,602	-				-1.4
2,722,602	-				+0.6
2,722,602	-				-1.4
2,722,602	-				-0.8
2,722,602	-				-0.7
2,722,602	-				-0.3
2,722,602	-				-0.0
2,722,602	-				+0.3
2,722,602	-				+0.3
2,722,602	-				+2.0
2,722,602	-				+0.1
2,722,602	-				+0.3
2,722,602	-				+0.6
2,722,602	-				+0.1
2,722,612	-				-0.7
2,722,716	-				+0.8
2,722,734	+				-0.4
2,722,851	+				+1.3
2,722,858	+				-2.1
2,722,866	-				+1.7
2,722,866	-				-0.0
2,722,899	-				-0.0
2,722,903	-				-0.9
2,722,918	-				+0.3
2,722,926	-				+0.9
2,722,939	+				+1.0
2,722,945	+				-0.0
2,722,967	+				-1.4
2,722,997	-				+0.8
2,723,003	+				-1.2
2,723,003	+				+1.4
2,723,011	-		CCNA_02571	0.10	+0.4
2,723,011	-		CCNA_02571	0.10	+1.0
2,723,011	-		CCNA_02571	0.10	-1.4
2,723,048	+		CCNA_02571	0.13	+0.1
2,723,056	-		CCNA_02571	0.13	-1.6
2,723,058	+		CCNA_02571	0.14	-0.5
2,723,058	+		CCNA_02571	0.14	-1.0
2,723,063	+		CCNA_02571	0.14	-0.2
2,723,066	-		CCNA_02571	0.14	-2.0
2,723,066	-		CCNA_02571	0.14	+0.0
2,723,066	-		CCNA_02571	0.14	-1.0
2,723,066	-		CCNA_02571	0.14	+0.5
2,723,066	-		CCNA_02571	0.14	+1.1
2,723,066	-		CCNA_02571	0.14	-0.9
2,723,068	+		CCNA_02571	0.14	+1.3
2,723,068	+		CCNA_02571	0.14	-0.7
2,723,076	-		CCNA_02571	0.15	+0.2
2,723,120	-		CCNA_02571	0.18	-0.6
2,723,147	-		CCNA_02571	0.20	-1.1
2,723,152	-		CCNA_02571	0.20	-1.3
2,723,158	+		CCNA_02571	0.20	-1.6
2,723,166	-		CCNA_02571	0.21	-0.6
2,723,171	-		CCNA_02571	0.21	-0.8
2,723,173	+		CCNA_02571	0.21	-1.0
2,723,189	+		CCNA_02571	0.22	+3.0
2,723,202	-		CCNA_02571	0.23	+0.4
2,723,202	-		CCNA_02571	0.23	+1.8
2,723,202	-		CCNA_02571	0.23	-1.1
2,723,239	+		CCNA_02571	0.26	+1.1
2,723,247	-		CCNA_02571	0.26	-0.5
2,723,275	+		CCNA_02571	0.28	+1.0
2,723,284	-		CCNA_02571	0.29	+1.5
2,723,301	-		CCNA_02571	0.30	-0.1
2,723,325	+		CCNA_02571	0.31	-1.0
2,723,325	+		CCNA_02571	0.31	-3.0
2,723,342	-		CCNA_02571	0.33	-0.9
2,723,517	+		CCNA_02571	0.44	-0.3
2,723,556	+		CCNA_02571	0.47	-0.7
2,723,564	-		CCNA_02571	0.47	-1.2
2,723,596	+		CCNA_02571	0.50	-0.3
2,723,596	+		CCNA_02571	0.50	-0.4
2,723,596	+		CCNA_02571	0.50	-1.2
2,723,596	+		CCNA_02571	0.50	-1.6
2,723,603	+		CCNA_02571	0.50	-0.3
2,723,604	-		CCNA_02571	0.50	-0.5
2,723,604	-		CCNA_02571	0.50	-0.5
2,723,625	+		CCNA_02571	0.52	-0.6
2,723,645	+		CCNA_02571	0.53	-1.4
2,723,664	+		CCNA_02571	0.54	-0.4
2,723,672	-		CCNA_02571	0.55	-0.4
2,723,696	-		CCNA_02571	0.56	-0.3
2,723,698	+		CCNA_02571	0.56	-0.9
2,723,706	-		CCNA_02571	0.57	-0.0
2,723,706	-		CCNA_02571	0.57	-1.5
2,723,707	+		CCNA_02571	0.57	-1.9
2,723,707	+		CCNA_02571	0.57	-0.0
2,723,715	-		CCNA_02571	0.58	-0.9
2,723,715	-		CCNA_02571	0.58	+0.1
2,723,722	-		CCNA_02571	0.58	-1.7
2,723,747	+		CCNA_02571	0.60	-0.5
2,723,790	+		CCNA_02571	0.63	-1.2
2,723,795	+		CCNA_02571	0.63	-1.3
2,723,802	+		CCNA_02571	0.63	+1.0
2,723,803	-		CCNA_02571	0.63	-0.5
2,723,809	+		CCNA_02571	0.64	-0.0
2,723,809	+		CCNA_02571	0.64	-1.7
2,723,809	+		CCNA_02571	0.64	-0.8
2,723,809	+		CCNA_02571	0.64	-2.7
2,723,809	+		CCNA_02571	0.64	-2.4
2,723,817	-		CCNA_02571	0.64	-0.8
2,723,817	-		CCNA_02571	0.64	-2.0
2,723,817	-		CCNA_02571	0.64	-1.6
2,723,817	-		CCNA_02571	0.64	+1.7
2,723,817	-		CCNA_02571	0.64	-1.4
2,723,817	-		CCNA_02571	0.64	-1.2
2,723,828	+		CCNA_02571	0.65	+0.7
2,723,836	-		CCNA_02571	0.66	+0.4
2,723,836	-		CCNA_02571	0.66	-1.9
2,723,868	+		CCNA_02571	0.68	-0.9
2,723,885	+		CCNA_02571	0.69	-0.9
2,723,890	+		CCNA_02571	0.69	-0.3
2,723,899	-		CCNA_02571	0.70	-0.3
2,723,899	-		CCNA_02571	0.70	-0.4
2,723,903	-		CCNA_02571	0.70	-0.8
2,723,953	+		CCNA_02571	0.73	-0.7
2,723,953	+		CCNA_02571	0.73	+2.0
2,723,953	-		CCNA_02571	0.73	-0.6
2,723,961	-		CCNA_02571	0.74	+0.6
2,723,961	-		CCNA_02571	0.74	-2.6
2,723,961	-		CCNA_02571	0.74	+0.1
2,724,009	-		CCNA_02571	0.77	+1.3
2,724,034	-		CCNA_02571	0.79	-0.6
2,724,043	+		CCNA_02571	0.80	-0.5
2,724,068	+		CCNA_02571	0.81	-0.9
2,724,073	+		CCNA_02571	0.82	-0.0
2,724,076	-		CCNA_02571	0.82	-0.8
2,724,078	+		CCNA_02571	0.82	+0.6
2,724,118	+		CCNA_02571	0.85	+0.7
2,724,153	-		CCNA_02571	0.87	-0.5
2,724,153	-		CCNA_02571	0.87	-1.8
2,724,210	-				-0.2
2,724,216	+				+0.5
2,724,216	+				-0.2
2,724,216	+				+1.5
2,724,216	+				+1.8
2,724,216	+				-1.0
2,724,216	+				-0.5
2,724,216	+				-1.0
2,724,216	+				+1.0
2,724,216	+				+0.4
2,724,216	+				-0.9
2,724,224	-				-1.0
2,724,224	-				+1.0
2,724,224	-				-0.2
2,724,224	-				+0.0
2,724,224	-				+1.4
2,724,224	-				-1.5
2,724,224	-				-0.6
2,724,224	-				-0.1
2,724,224	-				-0.8
2,724,229	-				+1.3
2,724,262	+				+1.8
2,724,279	-				+0.6
2,724,281	+				+0.6
2,724,284	-				-1.4
2,724,286	+				+3.3
2,724,286	+				+0.0
2,724,286	+				+0.2
2,724,286	+				-0.3
2,724,286	+				+1.5
2,724,286	+				+0.4
2,724,286	+				+0.1
2,724,286	+				-1.1
2,724,289	-				-0.2
2,724,289	-				-0.5
2,724,291	+				-0.7
2,724,294	-				-0.2
2,724,294	-				-0.5
2,724,294	-				+2.0
2,724,294	-				-0.3
2,724,319	+				+2.0
2,724,327	-				+1.0
2,724,336	+				+1.7
2,724,343	+				+0.2
2,724,419	+				-0.5
2,724,454	+				-0.4
2,724,475	-				-0.2
2,724,497	+				-2.2
2,724,542	-				-1.6
2,724,542	-				+0.7
2,724,542	-				+0.3
2,724,572	+				+1.0
2,724,593	+				+0.3
2,724,702	+		CCNA_02572	0.13	-0.5