Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01916

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
2,057,870	+				-0.1
2,057,880	+				+0.5
2,057,884	+				-1.4
2,057,915	-				-0.6
2,057,932	-				-2.5
2,057,981	+				+2.5
2,057,990	+				+1.2
2,057,991	+				-1.2
2,058,018	+		CCNA_01915	0.13	-0.5
2,058,044	-		CCNA_01915	0.16	+0.6
2,058,137	+		CCNA_01915	0.29	+0.1
2,058,191	+		CCNA_01915	0.36	+0.4
2,058,204	-		CCNA_01915	0.38	-0.3
2,058,229	+		CCNA_01915	0.41	-0.4
2,058,251	-		CCNA_01915	0.44	-0.7
2,058,253	+		CCNA_01915	0.45	-0.2
2,058,263	+		CCNA_01915	0.46	+2.2
2,058,263	+		CCNA_01915	0.46	-0.3
2,058,346	-		CCNA_01915	0.57	-1.3
2,058,346	-		CCNA_01915	0.57	-0.8
2,058,346	-		CCNA_01915	0.57	-0.6
2,058,365	-		CCNA_01915	0.60	+1.2
2,058,365	-		CCNA_01915	0.60	-2.0
2,058,369	+		CCNA_01915	0.60	+0.5
2,058,369	+		CCNA_01915	0.60	-0.4
2,058,377	-		CCNA_01915	0.61	+1.1
2,058,451	+		CCNA_01915	0.71	+1.9
2,058,459	-		CCNA_01915	0.72	-0.2
2,058,475	-		CCNA_01915	0.75	+2.0
2,058,505	+		CCNA_01915	0.79	-1.1
2,058,513	-		CCNA_01915	0.80	+3.0
2,058,513	-		CCNA_01915	0.80	+0.4
2,058,515	-		CCNA_01915	0.80	-0.3
2,058,639	+				+0.4
2,058,644	+				+0.2
2,058,652	-				-1.0
2,058,707	+		CCNA_03957	0.22	-1.7
2,058,707	+		CCNA_03957	0.22	-0.0
2,058,707	+		CCNA_03957	0.22	+0.6
2,058,707	+		CCNA_03957	0.22	-0.1
2,058,707	+		CCNA_03957	0.22	+0.4
2,058,707	+		CCNA_03957	0.22	-0.0
2,058,707	+		CCNA_03957	0.22	-0.2
2,058,715	-		CCNA_03957	0.26	-1.2
2,058,725	+		CCNA_03957	0.30	-0.3
2,058,725	-		CCNA_03957	0.30	-1.6
2,058,762	+		CCNA_03957	0.46	+0.2
2,058,762	+		CCNA_03957	0.46	+0.0
2,058,782	-		CCNA_03957	0.54	+0.0
2,058,788	-		CCNA_03957	0.57	-0.2
2,058,808	+		CCNA_03957	0.65	+0.0
2,058,816	-		CCNA_03957	0.69	-2.3
2,058,816	-		CCNA_03957	0.69	+0.2
2,058,942	+				-0.6
2,058,942	+				-0.2
2,058,950	-				+0.0
2,058,964	-		CCNA_01916	0.11	-0.9
2,058,990	+		CCNA_01916	0.13	+0.4
2,058,990	+		CCNA_01916	0.13	-1.1
2,058,998	-		CCNA_01916	0.14	-0.5
2,059,069	-		CCNA_01916	0.21	-0.4
2,059,137	-		CCNA_01916	0.28	+1.0
2,059,167	+		CCNA_01916	0.31	-0.2
2,059,167	+		CCNA_01916	0.31	-0.8
2,059,175	-		CCNA_01916	0.32	-0.9
2,059,212	+		CCNA_01916	0.36	+0.6
2,059,239	-		CCNA_01916	0.38	-0.9
2,059,239	-		CCNA_01916	0.38	+0.3
2,059,239	-		CCNA_01916	0.38	-2.4
2,059,242	+		CCNA_01916	0.39	-0.1
2,059,277	-		CCNA_01916	0.42	-0.7
2,059,277	-		CCNA_01916	0.42	+0.5
2,059,280	-				+1.6
2,059,290	+		CCNA_01916	0.44	-1.0
2,059,311	+		CCNA_01916	0.46	-1.0
2,059,311	+		CCNA_01916	0.46	-0.8
2,059,319	-		CCNA_01916	0.47	-1.3
2,059,319	-		CCNA_01916	0.47	+0.9
2,059,346	-		CCNA_01916	0.49	-0.6
2,059,374	-		CCNA_01916	0.52	+0.2
2,059,396	+		CCNA_01916	0.54	+0.4
2,059,460	-		CCNA_01916	0.61	-1.8
2,059,472	+		CCNA_01916	0.62	-1.7
2,059,480	-		CCNA_01916	0.63	-0.0
2,059,487	+		CCNA_01916	0.64	-0.1
2,059,505	+		CCNA_01916	0.65	-1.3
2,059,505	+		CCNA_01916	0.65	-1.9
2,059,513	-		CCNA_01916	0.66	+0.9
2,059,513	-		CCNA_01916	0.66	-1.6
2,059,518	+				+0.6
2,059,520	-		CCNA_01916	0.67	-0.3
2,059,526	-		CCNA_01916	0.67	-0.8
2,059,591	+		CCNA_01916	0.74	-0.8
2,059,599	+		CCNA_01916	0.75	-2.4
2,059,636	+		CCNA_01916	0.79	-0.1
2,059,644	-		CCNA_01916	0.79	-0.7
2,059,685	+		CCNA_01916	0.84	-1.9
2,059,693	-		CCNA_01916	0.84	-0.2
2,059,724	+		CCNA_01916	0.88	+0.9
2,059,725	-		CCNA_01916	0.88	-0.1
2,059,757	+				-1.2
2,059,768	+				-1.2
2,059,768	+				+0.4
2,059,770	-				+0.9
2,059,770	-				+1.0
2,059,770	-				-1.4
2,059,778	+				-1.6
2,059,825	-				+0.5
2,059,825	-				-0.9
2,059,832	+				+0.9
2,059,840	-				+1.0
2,059,878	+				+0.4
2,059,898	-				+0.6
2,059,915	-				+1.6
2,059,923	-				-0.6
2,059,951	+				-1.3
2,059,963	+				-0.8
2,059,965	+				+2.3
2,059,974	+				+0.8
2,059,976	+				-2.1
2,059,987	-				-0.2
2,060,003	+				-0.2
2,060,003	+				-0.1
2,060,005	-				+0.8
2,060,011	-				+1.1
2,060,011	-				+2.3
2,060,028	+				-0.8
2,060,159	-		CCNA_01917	0.15	+1.7
2,060,161	+		CCNA_01917	0.15	-0.7
2,060,162	-		CCNA_01917	0.16	+0.9
2,060,169	-		CCNA_01917	0.16	-1.4
2,060,169	-		CCNA_01917	0.16	+0.1
2,060,169	-		CCNA_01917	0.16	+0.2
2,060,169	-		CCNA_01917	0.16	-0.1
2,060,182	-		CCNA_01917	0.17	-1.4
2,060,206	+		CCNA_01917	0.19	+1.3
2,060,211	+		CCNA_01917	0.20	-1.5
2,060,214	-		CCNA_01917	0.20	+0.8
2,060,219	-		CCNA_01917	0.21	-1.6
2,060,219	-		CCNA_01917	0.21	-0.7
2,060,229	+		CCNA_01917	0.21	+0.9
2,060,237	-		CCNA_01917	0.22	+0.5
2,060,237	-		CCNA_01917	0.22	-1.2
2,060,269	-		CCNA_01917	0.25	+0.0
2,060,275	-		CCNA_01917	0.26	+1.9
2,060,300	-		CCNA_01917	0.28	+1.0
2,060,324	-		CCNA_01917	0.30	+2.3
2,060,332	+		CCNA_01917	0.31	-0.3
2,060,381	-		CCNA_01917	0.35	-0.9
2,060,386	-		CCNA_01917	0.35	-0.2
2,060,386	-		CCNA_01917	0.35	-0.9
2,060,414	+		CCNA_01917	0.38	-0.7
2,060,441	+		CCNA_01917	0.40	-1.1
2,060,441	+		CCNA_01917	0.40	-0.8
2,060,441	+		CCNA_01917	0.40	+0.1
2,060,467	-		CCNA_01917	0.43	-2.3
2,060,496	+		CCNA_01917	0.45	-2.3
2,060,513	-		CCNA_01917	0.47	-0.2
2,060,518	+		CCNA_01917	0.47	-1.9
2,060,538	-				+4.3
2,060,603	-		CCNA_01917	0.55	+0.5
2,060,604	-		CCNA_01917	0.55	+0.3
2,060,621	+		CCNA_01917	0.56	-0.4
2,060,667	-		CCNA_01917	0.60	-1.5
2,060,718	-		CCNA_01917	0.65	-1.3
2,060,766	+		CCNA_01917	0.69	-2.6
2,060,769	-		CCNA_01917	0.69	-0.0
2,060,774	-		CCNA_01917	0.70	-0.2
2,060,774	-		CCNA_01917	0.70	-0.4
2,060,774	-		CCNA_01917	0.70	-0.3
2,060,774	-		CCNA_01917	0.70	-1.1
2,060,795	+		CCNA_01917	0.72	+1.1
2,060,795	+		CCNA_01917	0.72	+0.3
2,060,795	+		CCNA_01917	0.72	-0.8
2,060,796	+		CCNA_01917	0.72	+0.1
2,060,827	-		CCNA_01917	0.74	-0.4
2,060,840	-		CCNA_01917	0.76	+0.1