Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01784

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
1,911,239	-				+1.4
1,911,298	+				+0.3
1,911,364	-				+0.6
1,911,379	-				+1.1
1,911,380	-				+1.2
1,912,084	+				-0.8
1,912,094	-				+0.4
1,912,152	-				+0.4
1,912,152	-				+2.1
1,912,165	+				-1.5
1,912,165	+				-0.7
1,912,165	+				+0.5
1,912,173	-				-0.8
1,912,173	-				-1.8
1,912,182	+				-0.9
1,912,182	+				+0.2
1,912,182	+				-0.3
1,912,190	-				-1.3
1,912,190	-				-2.8
1,912,190	-				-1.2
1,912,190	-				-1.5
1,912,307	-		CCNA_01784	0.20	-0.5
1,912,311	-		CCNA_01784	0.21	+0.1
1,912,344	-		CCNA_01784	0.30	-1.6
1,912,380	-				+3.4
1,912,380	-		CCNA_01784	0.39	-0.4
1,912,466	+		CCNA_01784	0.61	-0.1
1,912,471	+		CCNA_01784	0.62	+0.2
1,912,472	-		CCNA_01784	0.62	-0.6
1,912,491	-				-1.7
1,912,597	-				+0.3
1,912,638	-		CCNA_01785	0.25	-0.6
1,912,638	-		CCNA_01785	0.25	+0.6
1,912,652	+		CCNA_01785	0.27	+0.4
1,912,733	-		CCNA_01785	0.40	-1.7
1,912,733	-		CCNA_01785	0.40	-2.1
1,912,736	-		CCNA_01785	0.41	+0.4
1,912,741	-		CCNA_01785	0.42	-0.9
1,912,799	+		CCNA_01785	0.51	-0.3
1,912,834	-		CCNA_01785	0.57	-0.7
1,912,838	+		CCNA_01785	0.58	+0.1
1,912,838	+		CCNA_01785	0.58	-1.1
1,912,847	-		CCNA_01785	0.59	+1.1
1,912,856	+		CCNA_01785	0.60	-0.7
1,912,902	-		CCNA_01785	0.68	-1.9
1,912,941	+		CCNA_01785	0.74	+2.1
1,913,087	-				-0.6
1,913,087	-				-0.6
1,913,087	-				-0.6
1,913,087	-				-0.3
1,913,087	-				+1.1
1,913,087	-				-1.8
1,913,087	-				-0.8
1,913,091	+				-1.5
1,913,163	+				+0.3
1,913,174	-				+0.3
1,913,181	-				+0.6
1,913,206	-				+0.6
1,913,222	+				-0.5
1,913,223	-				-1.2
1,913,230	+				+1.5
1,913,235	+				-0.1
1,913,238	-				-1.3
1,913,238	-				-0.8
1,913,240	+				-0.9
1,913,243	-				+0.9
1,913,243	-				+0.3
1,913,248	-				+2.2
1,913,298	+				+0.8
1,913,298	+				-0.0
1,913,298	+				-0.3
1,913,298	+				+0.1
1,913,306	-				-1.0
1,913,306	-				+1.9
1,913,306	-				-0.8
1,913,308	+				+1.1
1,913,308	+				-0.5
1,913,308	+				-0.2
1,913,308	+				+1.4
1,913,316	-				+0.3
1,913,316	-				+1.4
1,913,318	+				+0.3
1,913,318	+				+0.2
1,913,326	-				-0.7
1,913,326	-				+0.8
1,913,341	+				-1.1
1,913,374	+				+0.8
1,913,374	+				-0.9
1,913,374	+				+1.2
1,913,374	+				+0.3
1,913,374	+				-0.4
1,913,382	-				+0.1
1,913,431	-				-1.2
1,913,434	+				-0.2
1,913,453	+				-1.3
1,913,453	+				-0.4
1,913,456	-				+0.2
1,913,458	+				-0.3
1,913,524	+				-1.5
1,913,524	+				-0.8
1,913,526	-				-0.3
1,913,526	-				+0.1
1,913,532	-				+0.0
1,913,536	+				+1.4
1,913,549	+				-2.5
1,913,549	+				-0.5
1,913,549	+				+0.4
1,913,557	-				+0.4
1,913,559	+				-0.8
1,913,597	-				+1.1
1,913,604	-				+1.8
1,913,617	+				-0.5