Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01497

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
1,605,957	-				-0.5
1,605,957	-				-1.4
1,605,957	-				+1.0
1,606,002	+				-0.3
1,606,028	+				+1.0
1,606,028	+				-0.7
1,606,034	+				+0.2
1,606,036	-				-0.2
1,606,064	+				+1.5
1,606,096	+				+1.6
1,606,936	+				+0.8
1,606,944	-				-0.2
1,606,969	+				+1.0
1,606,969	+				-0.8
1,607,228	+		CCNA_01497	0.27	+0.2
1,607,228	+		CCNA_01497	0.27	-0.8
1,607,424	+		CCNA_01497	0.47	+1.8
1,607,424	+		CCNA_01497	0.47	+0.2
1,607,424	+		CCNA_01497	0.47	-0.2
1,607,542	+		CCNA_01497	0.59	-1.0
1,607,701	+		CCNA_01497	0.75	-0.6
1,607,842	+		CCNA_01497	0.89	-1.1
1,607,845	+		CCNA_01497	0.89	-0.1
1,607,957	-				-0.1
1,607,976	+				+0.9
1,608,002	+				+0.1
1,608,002	+				-0.8
1,608,010	-				+0.8
1,608,010	-				-1.5
1,608,024	+				+0.2
1,608,024	+				+0.7
1,608,032	-				-1.5
1,608,032	-				-0.1
1,608,040	-				-0.7
1,608,077	+				+0.2
1,608,131	+				+1.4
1,608,139	-				-0.2
1,608,139	-				-1.0
1,608,139	-				-1.0
1,608,139	-				+0.8
1,608,139	-				-1.2
1,608,139	-				-0.0
1,608,149	+				+0.8
1,608,150	+				-0.4
1,608,157	-				-2.0
1,608,169	-				-0.6
1,608,169	-				-1.9
1,608,169	-				-1.3
1,608,169	-				-0.5
1,608,169	-				-1.2
1,608,169	-				+0.2
1,608,169	-				-1.7
1,608,169	-				-0.1
1,608,169	-				+1.0
1,608,176	+				-0.2
1,608,200	-				-0.5
1,608,201	+				+1.0
1,608,206	+		CCNA_01498	0.10	+0.8
1,608,209	-		CCNA_01498	0.10	-0.0
1,608,272	+		CCNA_01498	0.15	+0.0
1,608,306	-		CCNA_01498	0.17	-0.8
1,608,357	+		CCNA_01498	0.20	+0.5
1,608,388	+		CCNA_01498	0.23	-0.6
1,608,388	+		CCNA_01498	0.23	+0.1
1,608,396	-		CCNA_01498	0.23	+1.0
1,608,402	+		CCNA_01498	0.24	+0.2
1,608,403	+		CCNA_01498	0.24	+0.2
1,608,438	-		CCNA_01498	0.26	+0.2
1,608,438	-		CCNA_01498	0.26	-1.7
1,608,474	+		CCNA_01498	0.28	+1.0
1,608,474	+		CCNA_01498	0.28	+0.4
1,608,598	-		CCNA_01498	0.37	-1.3
1,608,620	+		CCNA_01498	0.38	-0.8
1,608,630	-		CCNA_01498	0.39	-0.9
1,608,790	+		CCNA_01498	0.50	-2.0
1,608,806	+		CCNA_01498	0.51	-1.8
1,608,861	-		CCNA_01498	0.55	-0.3
1,608,896	+		CCNA_01498	0.57	+0.8
1,608,921	-		CCNA_01498	0.59	+1.0
1,608,933	+		CCNA_01498	0.60	-0.8