Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01474

Experiment: PYE with Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Tetracycline 0.0001 mg/ml
1,581,303	+		CCNA_01473	0.54	+0.3
1,581,311	+		CCNA_01473	0.54	-0.8
1,581,311	+		CCNA_01473	0.54	-0.6
1,581,311	+		CCNA_01473	0.54	+0.4
1,581,311	-		CCNA_01473	0.54	-1.8
1,581,316	+		CCNA_01473	0.55	+0.7
1,581,335	+				+2.3
1,581,335	+		CCNA_01473	0.55	+0.9
1,581,343	-		CCNA_01473	0.56	-0.1
1,581,343	-		CCNA_01473	0.56	-0.8
1,581,361	-		CCNA_01473	0.57	-0.4
1,581,414	+		CCNA_01473	0.59	-1.9
1,581,414	+		CCNA_01473	0.59	+0.2
1,581,414	+		CCNA_01473	0.59	-0.6
1,581,414	+		CCNA_01473	0.59	-1.4
1,581,414	+		CCNA_01473	0.59	+0.6
1,581,422	-		CCNA_01473	0.59	+0.3
1,581,422	-		CCNA_01473	0.59	-1.0
1,581,422	-		CCNA_01473	0.59	-1.2
1,581,422	-				+1.0
1,581,422	-		CCNA_01473	0.59	-0.7
1,581,422	-		CCNA_01473	0.59	-1.3
1,581,422	-		CCNA_01473	0.59	+0.3
1,581,422	-		CCNA_01473	0.59	-2.3
1,581,422	-		CCNA_01473	0.59	-1.1
1,581,428	+		CCNA_01473	0.60	+0.7
1,581,436	-		CCNA_01473	0.60	-2.0
1,581,455	-		CCNA_01473	0.61	+0.5
1,581,471	+		CCNA_01473	0.62	-0.6
1,581,491	+		CCNA_01473	0.63	-0.0
1,581,550	+		CCNA_01473	0.65	-0.2
1,581,597	+		CCNA_01473	0.67	-1.4
1,581,597	+		CCNA_01473	0.67	-0.2
1,581,597	+		CCNA_01473	0.67	-0.4
1,581,602	+		CCNA_01473	0.68	-1.2
1,581,618	+		CCNA_01473	0.68	-1.0
1,581,621	+		CCNA_01473	0.69	-0.9
1,581,660	+		CCNA_01473	0.70	+0.4
1,581,660	+		CCNA_01473	0.70	+0.7
1,581,660	+		CCNA_01473	0.70	+2.9
1,581,660	+		CCNA_01473	0.70	-2.1
1,581,660	+		CCNA_01473	0.70	+0.5
1,581,660	+		CCNA_01473	0.70	-0.6
1,581,663	-		CCNA_01473	0.70	-1.8
1,581,700	+		CCNA_01473	0.72	-0.4
1,581,700	+		CCNA_01473	0.72	-1.2
1,581,714	+		CCNA_01473	0.73	-2.1
1,581,757	+		CCNA_01473	0.75	+0.7
1,581,759	+		CCNA_01473	0.75	-1.0
1,581,759	+		CCNA_01473	0.75	+0.5
1,581,825	+		CCNA_01473	0.78	+1.3
1,581,825	+		CCNA_01473	0.78	+1.3
1,581,877	+		CCNA_01473	0.80	+0.8
1,581,905	+		CCNA_01473	0.82	+0.8
1,581,911	-		CCNA_01473	0.82	+1.5
1,581,911	-		CCNA_01473	0.82	-0.7
1,581,913	-		CCNA_01473	0.82	-0.8
1,581,913	-		CCNA_01473	0.82	-0.1
1,581,963	+		CCNA_01473	0.84	-0.2
1,581,963	-		CCNA_01473	0.84	+0.7
1,581,999	+		CCNA_01473	0.86	+1.6
1,581,999	+		CCNA_01473	0.86	-0.2
1,582,002	-		CCNA_01473	0.86	+0.5
1,582,004	+		CCNA_01473	0.86	-0.9
1,582,004	+		CCNA_01473	0.86	-1.3
1,582,004	+		CCNA_01473	0.86	+0.6
1,582,004	+		CCNA_01473	0.86	-1.5
1,582,004	+		CCNA_01473	0.86	+0.3
1,582,012	-		CCNA_01473	0.87	-0.2
1,582,012	-		CCNA_01473	0.87	+0.2
1,582,012	-		CCNA_01473	0.87	+0.5
1,582,012	-		CCNA_01473	0.87	-0.7
1,582,012	-		CCNA_01473	0.87	-1.4
1,582,012	-		CCNA_01473	0.87	-1.5
1,582,026	-		CCNA_01473	0.87	-0.6
1,582,048	-		CCNA_01473	0.88	-1.6
1,582,050	+		CCNA_01473	0.88	-1.2
1,582,050	+		CCNA_01473	0.88	-0.6
1,582,050	+		CCNA_01473	0.88	-0.1
1,582,055	+		CCNA_01473	0.89	-0.9
1,582,058	-		CCNA_01473	0.89	-0.6
1,582,058	-		CCNA_01473	0.89	-0.0
1,582,058	-		CCNA_01473	0.89	-1.0
1,582,106	-				-1.1
1,582,177	-				-0.8
1,582,177	-				-1.4
1,582,199	+				+1.1
1,582,207	-				+2.0
1,582,252	+				-0.4
1,582,257	+				-1.4
1,582,265	-				-0.0
1,582,270	-				-1.0
1,582,311	+				-0.4
1,582,332	+		CCNA_01474	0.18	-1.7
1,582,337	+		CCNA_01474	0.21	-1.2
1,582,351	+		CCNA_01474	0.30	-1.2
1,582,393	-		CCNA_01474	0.55	+1.1
1,582,399	+		CCNA_01474	0.58	-0.5
1,582,425	+		CCNA_01474	0.74	+0.2
1,582,597	-				-2.2
1,582,659	+				-1.1
1,582,659	+				-2.0
1,582,674	-		CCNA_01475	0.12	+0.1
1,582,679	+		CCNA_01475	0.12	-0.4
1,582,687	-		CCNA_01475	0.14	-0.3
1,582,702	-		CCNA_01475	0.16	-0.3
1,582,735	-		CCNA_01475	0.21	+0.2
1,582,746	-				+0.5
1,582,750	-		CCNA_01475	0.23	-1.1
1,582,796	+		CCNA_01475	0.31	+0.0
1,582,804	-		CCNA_01475	0.32	-0.0
1,582,806	+				+1.0
1,582,814	-		CCNA_01475	0.33	-0.0
1,582,823	+		CCNA_01475	0.35	-0.5
1,582,827	-		CCNA_01475	0.35	-1.0
1,582,856	+		CCNA_01475	0.40	-1.1
1,582,864	+		CCNA_01475	0.41	-0.2
1,582,872	-		CCNA_01475	0.42	+2.1
1,582,874	-		CCNA_01475	0.43	-0.2
1,582,892	+		CCNA_01475	0.45	-2.2
1,582,918	-		CCNA_01475	0.49	-2.2
1,582,919	+		CCNA_01475	0.50	-2.5
1,582,947	+		CCNA_01475	0.54	-1.5
1,582,976	+		CCNA_01475	0.58	-1.1
1,582,981	+		CCNA_01475	0.59	-1.0
1,582,989	-		CCNA_01475	0.60	-0.0
1,582,998	+		CCNA_01475	0.62	-0.5
1,582,998	+		CCNA_01475	0.62	-0.4
1,583,005	+		CCNA_01475	0.63	+1.0
1,583,006	-		CCNA_01475	0.63	-0.2
1,583,006	-		CCNA_01475	0.63	-0.3
1,583,015	+		CCNA_01475	0.64	-1.2
1,583,023	-		CCNA_01475	0.66	-0.9
1,583,023	-		CCNA_01475	0.66	+0.0
1,583,047	+		CCNA_01475	0.69	-0.0
1,583,053	+		CCNA_01475	0.70	+0.3
1,583,070	+		CCNA_01475	0.73	-0.4
1,583,077	-		CCNA_01475	0.74	-1.2
1,583,079	+		CCNA_01475	0.74	-2.1
1,583,132	+		CCNA_01475	0.83	-1.3
1,583,165	+		CCNA_01475	0.88	+0.0
1,583,194	-				-0.5
1,583,205	-				-1.0
1,583,205	-				-0.9
1,583,238	+				+0.2
1,583,310	-				-1.2
1,583,323	+				-0.3
1,583,324	+				-1.1
1,583,324	+				-0.8
1,583,348	-				-1.1
1,583,369	-				+0.5
1,583,377	+				-0.8
1,583,385	-				-0.4
1,583,385	-				-0.1
1,583,413	-				+0.7
1,583,415	+				-0.3
1,583,437	-				-1.0
1,583,438	+				-2.0
1,583,438	+				-1.4